Anise · gene

Chr04.g30674

A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.

18,232
bp
Chr04:12,306,753–12,324,984
genomic location
Record overview

Feature identity

Identifier
Chr04.g30674
Feature type
gene
Genome collection
Anise
Organism
Persea americana-Anise
Sequence length
18,232 bp
Genomic location
Chr04:12,306,753–12,324,984
Strand
−
Open original Tripal record
Computational annotation

Functional evidence

These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.

eggNOG
4432.XP_010267359.1,A,[DEAD-box ATP-dependent RNA helicase]
Gene Ontology
DEAD-box ATP-dependent RNA helicase | GO:0001101//response to acid chemical; GO:0006139//nucleobase-containing compound metabolic process; GO:0006403//RNA localization; GO:0006405//RNA export from nucleus; GO:0006406//mRNA export from nucleus; GO:0006611//protein export from nucleus; GO:0006725//cellular aromatic compound metabolic process; GO:0006807//nitrogen compound metabolic process; GO:0006810//transport; GO:0006886//intracellular protein transport; GO:0006913//nucleocytoplasmic transport; GO:0006950//response to stress; GO:0008104//protein localization; GO:0008150//biological_process; GO:0008152//metabolic process; GO:0009266//response to temperature stimulus; GO:0009408//response to heat; GO:0009409//response to cold; GO:0009628//response to abiotic stimulus; GO:0009719//response to endogenous stimulus; GO:0009725//response to hormone; GO:0009737//response to abscisic acid; GO:0009987//cellular process; GO:0010033//response to organic substance; GO:0010467//gene expression; GO:0010501//RNA secondary structure unwinding; GO:0015031//protein transport; GO:0015833//peptide transport; GO:0015931//nucleobase-containing compound transport; GO:0016070//RNA metabolic process; GO:0016973//poly(A)+ mRNA export from nucleus; GO:0031503//protein complex localization; GO:0033036//macromolecule localization; GO:0033993//response to lipid; GO:0034613//cellular protein localization; GO:0034641//cellular nitrogen compound metabolic process; GO:0042221//response to chemical; GO:0042886//amide transport; GO:0043170//macromolecule metabolic process; GO:0044237//cellular metabolic process; GO:0044238//primary metabolic process; GO:0045184//establishment of protein localization; GO:0046483//heterocycle metabolic process; GO:0046907//intracellular transport; GO:0050657//nucleic acid transport; GO:0050658//RNA transport; GO:0050896//response to stimulus; GO:0051028//mRNA transport; GO:0051168//nuclear export; GO:0051169//nuclear transport; GO:0051179//localization; GO:0051234//establishment of localization; GO:0051236//establishment of RNA localization; GO:0051641//cellular localization; GO:0051649//establishment of localization in cell; GO:0070727//cellular macromolecule localization; GO:0071166//ribonucleoprotein complex localization; GO:0071426//ribonucleoprotein complex export from nucleus; GO:0071427//mRNA-containing ribonucleoprotein complex export from nucleus; GO:0071702//organic substance transport; GO:0071704//organic substance metabolic process; GO:0071705//nitrogen compound transport; GO:0090304//nucleic acid metabolic process; GO:0097305//response to alcohol; GO:1901360//organic cyclic compound metabolic process; GO:1901700//response to oxygen-containing compound | GO:0005575//cellular_component; GO:0005622//intracellular; GO:0005623//cell; GO:0005634//nucleus; GO:0005635//nuclear envelope; GO:0005730//nucleolus; GO:0005737//cytoplasm; GO:0005886//plasma membrane; GO:0012505//endomembrane system; GO:0016020//membrane; GO:0031967//organelle envelope; GO:0031974//membrane-enclosed lumen; GO:0031975//envelope; GO:0031981//nuclear lumen; GO:0043226//organelle; GO:0043227//membrane-bounded organelle; GO:0043228//non-membrane-bounded organelle; GO:0043229//intracellular organelle; GO:0043231//intracellular membrane-bounded organelle; GO:0043232//intracellular non-membrane-bounded organelle; GO:0043233//organelle lumen; GO:0044422//organelle part; GO:0044424//intracellular part; GO:0044428//nuclear part; GO:0044446//intracellular organelle part; GO:0044464//cell part; GO:0070013//intracellular organelle lumen; GO:0071944//cell periphery | GO:0003674//molecular_function; GO:0003724//RNA helicase activity; GO:0003824//catalytic activity; GO:0004004//ATP-dependent RNA helicase activity; GO:0004386//helicase activity; GO:0008026//ATP-dependent helicase activity; GO:0008186//RNA-dependent ATPase activity; GO:0016462//pyrophosphatase activity; GO:0016787//hydrolase activity; GO:0016817//hydrolase activity, acting on acid anhydrides; GO:0016818//hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides; GO:0016887//ATPase activity; GO:0017111//nucleoside-triphosphatase activity; GO:0042623//ATPase activity, coupled; GO:0070035//purine NTP-dependent helicase activity
KEGG
K18655 | DDX19, DBP5
NR
RWR91188.1 DEAD-box ATP-dependent RNA helicase 38 [Cinnamomum micranthum f. kanehirae]
Swiss-Prot
Q10RI7.1 RecName: Full=DEAD-box ATP-dependent RNA helicase 38 [Oryza sativa Japonica Group]
Biological context

Connected feature records

Follow parent–child relationships among genes, transcripts, coding regions, and protein products.