Feature identity
- Identifier
- PaHa12g08700.1
- Feature type
- mRNA
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 984 bp
- Genomic location
- 12:32,513,898–32,521,790
- Strand
- −
Hass · mRNA
PaHa12g08700.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 984
- bp
- 12:32,513,898–32,521,790
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: PaHa12g08700
- eggNOG
- Preferred name: LOC104598254 | Seed ortholog: 337451.A0A443Q192 | COG: COG0300 | eggNOG OG: adh_short@131567|Cbi-30
- Gene Ontology
- GO:0004090 carbonyl reductase (NADPH) activity; GO:0005515 protein binding; GO:0005789 endoplasmic reticulum membrane; GO:0016020 membrane; GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor; GO:0052650 all-trans-retinol dehydrogenase (NADP+) activity
- KEGG
- KO: K11165 | BRITE: 00001
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePaHa12g08700.1-protein
derives_frommRNAPaHa12g08700.1
mRNAPaHa12g08700.1
part_ofgenePaHa12g08700
CDS
part_ofPaHa12g08700.1-CDS-12-1787993825:32513898..32513987mRNAPaHa12g08700.1
CDS
part_ofPaHa12g08700.1-CDS-12-1787993825:32514827..32514892mRNAPaHa12g08700.1
CDS
part_ofPaHa12g08700.1-CDS-12-1787993825:32515257..32515340mRNAPaHa12g08700.1
CDS
part_ofPaHa12g08700.1-CDS-12-1787993825:32517020..32517118mRNAPaHa12g08700.1
CDS
part_ofPaHa12g08700.1-CDS-12-1787993825:32518898..32518996mRNAPaHa12g08700.1
CDS
part_ofPaHa12g08700.1-CDS-12-1787993825:32519104..32519196mRNAPaHa12g08700.1
CDS
part_ofPaHa12g08700.1-CDS-12-1787993825:32519284..32519322mRNAPaHa12g08700.1
CDS
part_ofPaHa12g08700.1-CDS-12-1787993825:32519809..32519957mRNAPaHa12g08700.1
CDS
part_ofPaHa12g08700.1-CDS-12-1787993825:32520100..32520198mRNAPaHa12g08700.1
CDS
part_ofPaHa12g08700.1-CDS-12-1787993825:32521373..32521406mRNAPaHa12g08700.1
CDS
part_ofPaHa12g08700.1-CDS-12-1787993825:32521509..32521564mRNAPaHa12g08700.1
CDS
part_ofPaHa12g08700.1-CDS-12-1787993825:32521715..32521790mRNAPaHa12g08700.1
exon
part_ofPaHa12g08700.1-exon-12-1787993825:32513898..32513987mRNAPaHa12g08700.1
exon
part_ofPaHa12g08700.1-exon-12-1787993825:32514827..32514892mRNAPaHa12g08700.1
exon
part_ofPaHa12g08700.1-exon-12-1787993825:32515257..32515340mRNAPaHa12g08700.1
exon
part_ofPaHa12g08700.1-exon-12-1787993825:32517020..32517118mRNAPaHa12g08700.1
exon
part_ofPaHa12g08700.1-exon-12-1787993825:32518898..32518996mRNAPaHa12g08700.1
exon
part_ofPaHa12g08700.1-exon-12-1787993825:32519104..32519196mRNAPaHa12g08700.1
exon
part_ofPaHa12g08700.1-exon-12-1787993825:32519284..32519322mRNAPaHa12g08700.1
exon
part_ofPaHa12g08700.1-exon-12-1787993825:32519809..32519957mRNAPaHa12g08700.1
exon
part_ofPaHa12g08700.1-exon-12-1787993825:32520100..32520198mRNAPaHa12g08700.1
exon
part_ofPaHa12g08700.1-exon-12-1787993825:32521373..32521406mRNAPaHa12g08700.1
exon
part_ofPaHa12g08700.1-exon-12-1787993825:32521509..32521564mRNAPaHa12g08700.1
exon
part_ofPaHa12g08700.1-exon-12-1787993825:32521715..32521790mRNAPaHa12g08700.1
