Feature identity
- Identifier
- PaHa12g08240.1
- Feature type
- mRNA
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 483 bp
- Genomic location
- 12:31,396,559–31,401,981
- Strand
- +
Hass · mRNA
PaHa12g08240.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 483
- bp
- 12:31,396,559–31,401,981
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: PaHa12g08240
- eggNOG
- Preferred name: LOC110785410 | Seed ortholog: 542762.A0A4S4DFK0 | COG: S | eggNOG OG: Sep15_SelM@131567|A-1*, Sep15_SelM@2759|C-2
- Gene Ontology
- GO:0003674 molecular_function; GO:0005515 protein binding; GO:0005575 cellular_component; GO:0005634 nucleus; GO:0005783 endoplasmic reticulum; GO:0005788 endoplasmic reticulum lumen; GO:0008150 biological_process; GO:0008379 thioredoxin peroxidase activity; GO:0008430 selenium binding; GO:0012505 endomembrane system; GO:0015038 glutathione disulfide oxidoreductase activity; GO:0032496 response to lipopolysaccharide; GO:0035092 sperm DNA condensation; GO:0045454 cell redox homeostasis; GO:0051084 'de novo' post-translational protein folding
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePaHa12g08240.1-protein
derives_frommRNAPaHa12g08240.1
mRNAPaHa12g08240.1
part_ofgenePaHa12g08240
CDS
part_ofPaHa12g08240.1-CDS-12-1787993825:31396559..31396724mRNAPaHa12g08240.1
CDS
part_ofPaHa12g08240.1-CDS-12-1787993825:31398658..31398716mRNAPaHa12g08240.1
CDS
part_ofPaHa12g08240.1-CDS-12-1787993825:31399704..31399885mRNAPaHa12g08240.1
CDS
part_ofPaHa12g08240.1-CDS-12-1787993825:31401906..31401981mRNAPaHa12g08240.1
exon
part_ofPaHa12g08240.1-exon-12-1787993825:31396559..31396724mRNAPaHa12g08240.1
exon
part_ofPaHa12g08240.1-exon-12-1787993825:31398658..31398716mRNAPaHa12g08240.1
exon
part_ofPaHa12g08240.1-exon-12-1787993825:31399704..31399885mRNAPaHa12g08240.1
exon
part_ofPaHa12g08240.1-exon-12-1787993825:31401906..31401981mRNAPaHa12g08240.1
