Anise · gene

Chr04.g35982

A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.

6,772
bp
Chr04:57,754,832–57,761,603
genomic location
Record overview

Feature identity

Identifier
Chr04.g35982
Feature type
gene
Genome collection
Anise
Organism
Persea americana-Anise
Sequence length
6,772 bp
Genomic location
Chr04:57,754,832–57,761,603
Strand
−
Open original Tripal record
Computational annotation

Functional evidence

These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.

eggNOG
3641.EOY15997,LT,[atcry1,blu1,cry1,hy4,oop2]
Gene Ontology
atcry1,blu1,cry1,hy4,oop2 | GO:0000302//response to reactive oxygen species; GO:0000304//response to singlet oxygen; GO:0001101//response to acid chemical; GO:0001558//regulation of cell growth; GO:0002682//regulation of immune system process; GO:0002684//positive regulation of immune system process; GO:0002831//regulation of response to biotic stimulus; GO:0002833//positive regulation of response to biotic stimulus; GO:0006139//nucleobase-containing compound metabolic process; GO:0006464//cellular protein modification process; GO:0006468//protein phosphorylation; GO:0006725//cellular aromatic compound metabolic process; GO:0006732//coenzyme metabolic process; GO:0006753//nucleoside phosphate metabolic process; GO:0006793//phosphorus metabolic process; GO:0006796//phosphate-containing compound metabolic process; GO:0006807//nitrogen compound metabolic process; GO:0006810//transport; GO:0006873//cellular ion homeostasis; GO:0006874//cellular calcium ion homeostasis; GO:0006875//cellular metal ion homeostasis; GO:0006950//response to stress; GO:0006979//response to oxidative stress; GO:0007154//cell communication; GO:0007165//signal transduction; GO:0007275//multicellular organism development; GO:0007584//response to nutrient; GO:0007623//circadian rhythm; GO:0008150//biological_process; GO:0008152//metabolic process; GO:0008219//cell death; GO:0009117//nucleotide metabolic process; GO:0009314//response to radiation; GO:0009414//response to water deprivation; GO:0009415//response to water; GO:0009416//response to light stimulus; GO:0009581//detection of external stimulus; GO:0009582//detection of abiotic stimulus; GO:0009583//detection of light stimulus; GO:0009605//response to external stimulus; GO:0009606//tropism; GO:0009628//response to abiotic stimulus; GO:0009637//response to blue light; GO:0009638//phototropism; GO:0009639//response to red or far red light; GO:0009640//photomorphogenesis; GO:0009642//response to light intensity; GO:0009644//response to high light intensity; GO:0009645//response to low light intensity stimulus; GO:0009646//response to absence of light; GO:0009719//response to endogenous stimulus; GO:0009725//response to hormone; GO:0009785//blue light signaling pathway; GO:0009791//post-embryonic development; GO:0009812//flavonoid metabolic process; GO:0009888//tissue development; GO:0009914//hormone transport; GO:0009987//cellular process; GO:0009991//response to extracellular stimulus; GO:0010033//response to organic substance; GO:0010035//response to inorganic substance; GO:0010073//meristem maintenance; GO:0010075//regulation of meristem growth; GO:0010112//regulation of systemic acquired resistance; GO:0010114//response to red light; GO:0010117//photoprotection; GO:0010118//stomatal movement; GO:0010218//response to far red light; GO:0010244//response to low fluence blue light stimulus by blue low-fluence system; GO:0010310//regulation of hydrogen peroxide metabolic process; GO:0010343//singlet oxygen-mediated programmed cell death; GO:0010359//regulation of anion channel activity; GO:0010617//circadian regulation of calcium ion oscillation; GO:0010817//regulation of hormone levels; GO:0012501//programmed cell death; GO:0014070//response to organic cyclic compound; GO:0016310//phosphorylation; GO:0019222//regulation of metabolic process; GO:0019538//protein metabolic process; GO:0019637//organophosphate metabolic process; GO:0019725//cellular homeostasis; GO:0022603//regulation of anatomical structure morphogenesis; GO:0022604//regulation of cell morphogenesis; GO:0022898//regulation of transmembrane transporter activity; GO:0023052//signaling; GO:0030003//cellular cation homeostasis; GO:0030522//intracellular receptor signaling pathway; GO:0031323//regulation of cellular metabolic process; GO:0031347//regulation of defense response; GO:0031349//positive regulation of defense response; GO:0031667//response to nutrient levels; GO:0031668//cellular response to extracellular stimulus; GO:0031669//cellular response to nutrient levels; GO:0031670//cellular response to nutrient; GO:0032101//regulation of response to external stimulus; GO:0032103//positive regulation of response to external stimulus; GO:0032409//regulation of transporter activity; GO:0032411//positive regulation of transporter activity; GO:0032412//regulation of ion transmembrane transporter activity; GO:0032414//positive regulation of ion transmembrane transporter activity; GO:0032501//multicellular organismal process; GO:0032502//developmental process; GO:0032879//regulation of localization; GO:0033554//cellular response to stress; GO:0033993//response to lipid; GO:0034599//cellular response to oxidative stress; GO:0034614//cellular response to reactive oxygen species; GO:0034641//cellular nitrogen compound metabolic process; GO:0034762//regulation of transmembrane transport; GO:0034764//positive regulation of transmembrane transport; GO:0034765//regulation of ion transmembrane transport; GO:0034767//positive regulation of ion transmembrane transport; GO:0035690//cellular response to drug; GO:0036211//protein modification process; GO:0036473//cell death in response to oxidative stress; GO:0040008//regulation of growth; GO:0042221//response to chemical; GO:0042440//pigment metabolic process; GO:0042493//response to drug; GO:0042592//homeostatic process; GO:0042726//flavin-containing compound metabolic process; GO:0042752//regulation of circadian rhythm; GO:0043170//macromolecule metabolic process; GO:0043269//regulation of ion transport; GO:0043270//positive regulation of ion transport; GO:0043412//macromolecule modification; GO:0043900//regulation of multi-organism process; GO:0043902//positive regulation of multi-organism process; GO:0044070//regulation of anion transport; GO:0044093//positive regulation of molecular function; GO:0044237//cellular metabolic process; GO:0044238//primary metabolic process; GO:0044260//cellular macromolecule metabolic process; GO:0044267//cellular protein metabolic process; GO:0044281//small molecule metabolic process; GO:0045088//regulation of innate immune response; GO:0045089//positive regulation of innate immune response; GO:0046283//anthocyanin-containing compound metabolic process; GO:0046483//heterocycle metabolic process; GO:0046777//protein autophosphorylation; GO:0048507//meristem development; GO:0048509//regulation of meristem development; GO:0048511//rhythmic process; GO:0048518//positive regulation of biological process; GO:0048519//negative regulation of biological process; GO:0048580//regulation of post-embryonic development; GO:0048581//negative regulation of post-embryonic development; GO:0048583//regulation of response to stimulus; GO:0048584//positive regulation of response to stimulus; GO:0048638//regulation of developmental growth; GO:0048731//system development; GO:0048831//regulation of shoot system development; GO:0048856//anatomical structure development; GO:0048878//chemical homeostasis; GO:0050776//regulation of immune response; GO:0050778//positive regulation of immune response; GO:0050789//regulation of biological process; GO:0050793//regulation of developmental process; GO:0050794//regulation of cellular process; GO:0050801//ion homeostasis; GO:0050896//response to stimulus; GO:0051049//regulation of transport; GO:0051050//positive regulation of transport; GO:0051093//negative regulation of developmental process; GO:0051128//regulation of cellular component organization; GO:0051179//localization; GO:0051186//cofactor metabolic process; GO:0051193//regulation of cofactor metabolic process; GO:0051234//establishment of localization; GO:0051239//regulation of multicellular organismal process; GO:0051241//negative regulation of multicellular organismal process; GO:0051480//regulation of cytosolic calcium ion concentration; GO:0051510//regulation of unidimensional cell growth; GO:0051606//detection of stimulus; GO:0051716//cellular response to stimulus; GO:0055065//metal ion homeostasis; GO:0055074//calcium ion homeostasis; GO:0055080//cation homeostasis; GO:0055082//cellular chemical homeostasis; GO:0055086//nucleobase-containing small molecule metabolic process; GO:0055114//oxidation-reduction process; GO:0060918//auxin transport; GO:0065007//biological regulation; GO:0065008//regulation of biological quality; GO:0065009//regulation of molecular function; GO:0070887//cellular response to chemical stimulus; GO:0071000//response to magnetism; GO:0071214//cellular response to abiotic stimulus; GO:0071452//cellular response to singlet oxygen; GO:0071478//cellular response to radiation; GO:0071482//cellular response to light stimulus; GO:0071483//cellular response to blue light; GO:0071496//cellular response to external stimulus; GO:0071704//organic substance metabolic process; GO:0072387//flavin adenine dinucleotide metabolic process; GO:0072503//cellular divalent inorganic cation homeostasis; GO:0072507//divalent inorganic cation homeostasis; GO:0080134//regulation of response to stress; GO:0097468//programmed cell death in response to reactive oxygen species; GO:0098771//inorganic ion homeostasis; GO:0099402//plant organ development; GO:1900424//regulation of defense response to bacterium; GO:1900426//positive regulation of defense response to bacterium; GO:1900618//regulation of shoot system morphogenesis; GO:1901332//negative regulation of lateral root development; GO:1901360//organic cyclic compound metabolic process; GO:1901371//regulation of leaf morphogenesis; GO:1901529//positive regulation of anion channel activity; GO:1901564//organonitrogen compound metabolic process; GO:1901672//positive regulation of systemic acquired resistance; GO:1901700//response to oxygen-containing compound; GO:1901701//cellular response to oxygen-containing compound; GO:1902347//response to strigolactone; GO:1902446//regulation of shade avoidance; GO:1902448//positive regulation of shade avoidance; GO:1903793//positive regulation of anion transport; GO:1903959//regulation of anion transmembrane transport; GO:1903961//positive regulation of anion transmembrane transport; GO:1905421//regulation of plant organ morphogenesis; GO:2000023//regulation of lateral root development; GO:2000024//regulation of leaf development; GO:2000026//regulation of multicellular organismal development; GO:2000030//regulation of response to red or far red light; GO:2000069//regulation of post-embryonic root development; GO:2000280//regulation of root development; GO:2000377//regulation of reactive oxygen species metabolic process | GO:0005575//cellular_component; GO:0005622//intracellular; GO:0005623//cell; GO:0005634//nucleus; GO:0005654//nucleoplasm; GO:0005737//cytoplasm; GO:0016604//nuclear body; GO:0031974//membrane-enclosed lumen; GO:0031981//nuclear lumen; GO:0043226//organelle; GO:0043227//membrane-bounded organelle; GO:0043229//intracellular organelle; GO:0043231//intracellular membrane-bounded organelle; GO:0043233//organelle lumen; GO:0044422//organelle part; GO:0044424//intracellular part; GO:0044428//nuclear part; GO:0044446//intracellular organelle part; GO:0044451//nucleoplasm part; GO:0044464//cell part; GO:0070013//intracellular organelle lumen | GO:0000166//nucleotide binding; GO:0003674//molecular_function; GO:0003824//catalytic activity; GO:0004672//protein kinase activity; GO:0005488//binding; GO:0005515//protein binding; GO:0005524//ATP binding; GO:0008144//drug binding; GO:0009881//photoreceptor activity; GO:0009882//blue light photoreceptor activity; GO:0016301//kinase activity; GO:0016740//transferase activity; GO:0016772//transferase activity, transferring phosphorus-containing groups; GO:0016773//phosphotransferase activity, alcohol group as acceptor; GO:0017076//purine nucleotide binding; GO:0030554//adenyl nucleotide binding; GO:0032553//ribonucleotide binding; GO:0032555//purine ribonucleotide binding; GO:0032559//adenyl ribonucleotide binding; GO:0035639//purine ribonucleoside triphosphate binding; GO:0036094//small molecule binding; GO:0038023//signaling receptor activity; GO:0042802//identical protein binding; GO:0043167//ion binding; GO:0043168//anion binding; GO:0048037//cofactor binding; GO:0050660//flavin adenine dinucleotide binding; GO:0050662//coenzyme binding; GO:0060089//molecular transducer activity; GO:0071949//FAD binding; GO:0097159//organic cyclic compound binding; GO:0097367//carbohydrate derivative binding; GO:1901265//nucleoside phosphate binding; GO:1901363//heterocyclic compound binding
KEGG
K12118 | CRY1
NR
RWR89914.1 cryptochrome 1.2 [Cinnamomum micranthum f. kanehirae]
Swiss-Prot
Q43125.2 RecName: Full=Cryptochrome-1; Short=AtCry; Short=Atcry1; AltName: Full=Blue light photoreceptor; AltName: Full=Protein BLUE LIGHT UNINHIBITED 1; AltName: Full=Protein ELONGATED HYPOCOTYL 4; AltName: Full=Protein OUT OF PHASE 2; Short=OOP2 [Arabidopsis thaliana]
Biological context

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