Anise · gene

Chr05.g39602

A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.

4,169
bp
Chr05:35,780,590–35,784,758
genomic location
Record overview

Feature identity

Identifier
Chr05.g39602
Feature type
gene
Genome collection
Anise
Organism
Persea americana-Anise
Sequence length
4,169 bp
Genomic location
Chr05:35,780,590–35,784,758
Strand
−
Open original Tripal record
Computational annotation

Functional evidence

These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.

eggNOG
71139.XP_010059793.1,E,[Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase]
Gene Ontology
Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase | GO:0000105//histidine biosynthetic process; GO:0000162//tryptophan biosynthetic process; GO:0006082//organic acid metabolic process; GO:0006520//cellular amino acid metabolic process; GO:0006547//histidine metabolic process; GO:0006568//tryptophan metabolic process; GO:0006576//cellular biogenic amine metabolic process; GO:0006586//indolalkylamine metabolic process; GO:0006725//cellular aromatic compound metabolic process; GO:0006807//nitrogen compound metabolic process; GO:0008150//biological_process; GO:0008152//metabolic process; GO:0008652//cellular amino acid biosynthetic process; GO:0009058//biosynthetic process; GO:0009072//aromatic amino acid family metabolic process; GO:0009073//aromatic amino acid family biosynthetic process; GO:0009308//amine metabolic process; GO:0009309//amine biosynthetic process; GO:0009987//cellular process; GO:0016053//organic acid biosynthetic process; GO:0018130//heterocycle biosynthetic process; GO:0019438//aromatic compound biosynthetic process; GO:0019752//carboxylic acid metabolic process; GO:0034641//cellular nitrogen compound metabolic process; GO:0042401//cellular biogenic amine biosynthetic process; GO:0042430//indole-containing compound metabolic process; GO:0042435//indole-containing compound biosynthetic process; GO:0043436//oxoacid metabolic process; GO:0044106//cellular amine metabolic process; GO:0044237//cellular metabolic process; GO:0044238//primary metabolic process; GO:0044249//cellular biosynthetic process; GO:0044271//cellular nitrogen compound biosynthetic process; GO:0044281//small molecule metabolic process; GO:0044283//small molecule biosynthetic process; GO:0046219//indolalkylamine biosynthetic process; GO:0046394//carboxylic acid biosynthetic process; GO:0046483//heterocycle metabolic process; GO:0052803//imidazole-containing compound metabolic process; GO:0071704//organic substance metabolic process; GO:1901360//organic cyclic compound metabolic process; GO:1901362//organic cyclic compound biosynthetic process; GO:1901564//organonitrogen compound metabolic process; GO:1901566//organonitrogen compound biosynthetic process; GO:1901576//organic substance biosynthetic process; GO:1901605//alpha-amino acid metabolic process; GO:1901607//alpha-amino acid biosynthetic process | GO:0005575//cellular_component; GO:0005622//intracellular; GO:0005623//cell; GO:0005737//cytoplasm; GO:0009507//chloroplast; GO:0009532//plastid stroma; GO:0009536//plastid; GO:0009570//chloroplast stroma; GO:0043226//organelle; GO:0043227//membrane-bounded organelle; GO:0043229//intracellular organelle; GO:0043231//intracellular membrane-bounded organelle; GO:0044422//organelle part; GO:0044424//intracellular part; GO:0044434//chloroplast part; GO:0044435//plastid part; GO:0044444//cytoplasmic part; GO:0044446//intracellular organelle part; GO:0044464//cell part | GO:0003674//molecular_function; GO:0003824//catalytic activity; GO:0003949//1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase activity; GO:0016853//isomerase activity; GO:0016860//intramolecular oxidoreductase activity; GO:0016861//intramolecular oxidoreductase activity, interconverting aldoses and ketoses
KEGG
K01814 | hisA
NR
RWR83545.1 Histidine biosynthesis [Cinnamomum micranthum f. kanehirae]
Swiss-Prot
O82782.1 RecName: Full=1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase, chloroplastic; AltName: Full=5-proFAR isomerase; AltName: Full=BBM II; AltName: Full=Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase; AltName: Full=Protein ALBINO AND PALE GREEN 10; AltName: Full=Protein HISTIDINE BIOSYNTHESIS 3; Flags: Precursor [Arabidopsis thaliana]
Biological context

Connected feature records

Follow parent–child relationships among genes, transcripts, coding regions, and protein products.