Computational annotationFunctional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
- eggNOG
- 4432.XP_010247686.1,A,[RNA binding (RRM RBD RNP motifs) family protein]
- Gene Ontology
- RNA binding (RRM RBD RNP motifs) family protein | GO:0000165//MAPK cascade; GO:0002237//response to molecule of bacterial origin; GO:0006464//cellular protein modification process; GO:0006468//protein phosphorylation; GO:0006793//phosphorus metabolic process; GO:0006796//phosphate-containing compound metabolic process; GO:0006807//nitrogen compound metabolic process; GO:0007154//cell communication; GO:0007165//signal transduction; GO:0008150//biological_process; GO:0008152//metabolic process; GO:0009605//response to external stimulus; GO:0009607//response to biotic stimulus; GO:0009617//response to bacterium; GO:0009892//negative regulation of metabolic process; GO:0009894//regulation of catabolic process; GO:0009987//cellular process; GO:0010033//response to organic substance; GO:0010468//regulation of gene expression; GO:0010605//negative regulation of macromolecule metabolic process; GO:0010608//posttranscriptional regulation of gene expression; GO:0010629//negative regulation of gene expression; GO:0016310//phosphorylation; GO:0019219//regulation of nucleobase-containing compound metabolic process; GO:0019222//regulation of metabolic process; GO:0019538//protein metabolic process; GO:0023014//signal transduction by protein phosphorylation; GO:0023052//signaling; GO:0031323//regulation of cellular metabolic process; GO:0031324//negative regulation of cellular metabolic process; GO:0031329//regulation of cellular catabolic process; GO:0031440//regulation of mRNA 3'-end processing; GO:0031441//negative regulation of mRNA 3'-end processing; GO:0032496//response to lipopolysaccharide; GO:0033993//response to lipid; GO:0035556//intracellular signal transduction; GO:0036211//protein modification process; GO:0042221//response to chemical; GO:0043085//positive regulation of catalytic activity; GO:0043170//macromolecule metabolic process; GO:0043207//response to external biotic stimulus; GO:0043412//macromolecule modification; GO:0043487//regulation of RNA stability; GO:0043488//regulation of mRNA stability; GO:0044093//positive regulation of molecular function; GO:0044237//cellular metabolic process; GO:0044238//primary metabolic process; GO:0044260//cellular macromolecule metabolic process; GO:0044267//cellular protein metabolic process; GO:0045934//negative regulation of nucleobase-containing compound metabolic process; GO:0048519//negative regulation of biological process; GO:0048523//negative regulation of cellular process; GO:0050684//regulation of mRNA processing; GO:0050686//negative regulation of mRNA processing; GO:0050789//regulation of biological process; GO:0050790//regulation of catalytic activity; GO:0050794//regulation of cellular process; GO:0050896//response to stimulus; GO:0051171//regulation of nitrogen compound metabolic process; GO:0051172//negative regulation of nitrogen compound metabolic process; GO:0051252//regulation of RNA metabolic process; GO:0051253//negative regulation of RNA metabolic process; GO:0051338//regulation of transferase activity; GO:0051347//positive regulation of transferase activity; GO:0051704//multi-organism process; GO:0051707//response to other organism; GO:0051716//cellular response to stimulus; GO:0060255//regulation of macromolecule metabolic process; GO:0061013//regulation of mRNA catabolic process; GO:0065007//biological regulation; GO:0065008//regulation of biological quality; GO:0065009//regulation of molecular function; GO:0070887//cellular response to chemical stimulus; GO:0071216//cellular response to biotic stimulus; GO:0071219//cellular response to molecule of bacterial origin; GO:0071222//cellular response to lipopolysaccharide; GO:0071310//cellular response to organic substance; GO:0071396//cellular response to lipid; GO:0071704//organic substance metabolic process; GO:0080090//regulation of primary metabolic process; GO:1900363//regulation of mRNA polyadenylation; GO:1900364//negative regulation of mRNA polyadenylation; GO:1901564//organonitrogen compound metabolic process; GO:1901700//response to oxygen-containing compound; GO:1901701//cellular response to oxygen-containing compound; GO:1903311//regulation of mRNA metabolic process; GO:1903312//negative regulation of mRNA metabolic process; GO:1904245//regulation of polynucleotide adenylyltransferase activity; GO:1904247//positive regulation of polynucleotide adenylyltransferase activity | GO:0005575//cellular_component; GO:0005622//intracellular; GO:0005623//cell; GO:0005634//nucleus; GO:0005654//nucleoplasm; GO:0005737//cytoplasm; GO:0016234//inclusion body; GO:0016604//nuclear body; GO:0016607//nuclear speck; GO:0031974//membrane-enclosed lumen; GO:0031981//nuclear lumen; GO:0032991//macromolecular complex; GO:0042405//nuclear inclusion body; GO:0043226//organelle; GO:0043227//membrane-bounded organelle; GO:0043229//intracellular organelle; GO:0043231//intracellular membrane-bounded organelle; GO:0043233//organelle lumen; GO:0044422//organelle part; GO:0044424//intracellular part; GO:0044428//nuclear part; GO:0044444//cytoplasmic part; GO:0044446//intracellular organelle part; GO:0044451//nucleoplasm part; GO:0044464//cell part; GO:0048471//perinuclear region of cytoplasm; GO:0070013//intracellular organelle lumen; GO:1990904//ribonucleoprotein complex | GO:0003674//molecular_function; GO:0003676//nucleic acid binding; GO:0003723//RNA binding; GO:0003727//single-stranded RNA binding; GO:0005488//binding; GO:0005515//protein binding; GO:0008143//poly(A) binding; GO:0019899//enzyme binding; GO:0043621//protein self-association; GO:0070063//RNA polymerase binding; GO:0070717//poly-purine tract binding; GO:0097159//organic cyclic compound binding; GO:1901363//heterocyclic compound binding
- NR
- RWR82832.1 RNA recognition motif domain-containing protein [Cinnamomum micranthum f. kanehirae]
- Swiss-Prot
- Q44560.3 RecName: Full=Putative RNA-binding protein RbpA [Nostoc sp. PCC 7120 = FACHB-418]