Feature identity
- Identifier
- PaHa12g05530.1
- Feature type
- mRNA
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 438 bp
- Genomic location
- 12:25,791,326–25,797,529
- Strand
- −
Hass · mRNA
PaHa12g05530.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 438
- bp
- 12:25,791,326–25,797,529
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: PaHa12g05530
- eggNOG
- Preferred name: TCP2 | Seed ortholog: 4432.A0A1U7ZI86 | COG: S | eggNOG OG: TCP@131567|A-1*, TCP@2759|F-3, TCP@3398|AO-8, TCP@58023|f-6
- Gene Ontology
- GO:0003677 DNA binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0006355 regulation of DNA-templated transcription; GO:0008285 negative regulation of cell population proliferation; GO:0009637 response to blue light; GO:0045944 positive regulation of transcription by RNA polymerase II; GO:0048366 leaf development; GO:2000306 positive regulation of photomorphogenesis
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePaHa12g05530.1-protein
derives_frommRNAPaHa12g05530.1
mRNAPaHa12g05530.1
part_ofgenePaHa12g05530
CDS
part_ofPaHa12g05530.1-CDS-12-1787993825:25791326..25791599mRNAPaHa12g05530.1
CDS
part_ofPaHa12g05530.1-CDS-12-1787993825:25797366..25797529mRNAPaHa12g05530.1
exon
part_ofPaHa12g05530.1-exon-12-1787993825:25791326..25791599mRNAPaHa12g05530.1
exon
part_ofPaHa12g05530.1-exon-12-1787993825:25797366..25797529mRNAPaHa12g05530.1
