Anise · gene

Chr05.g43466

A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.

7,916
bp
Chr05:80,683,643–80,691,558
genomic location
Record overview

Feature identity

Identifier
Chr05.g43466
Feature type
gene
Genome collection
Anise
Organism
Persea americana-Anise
Sequence length
7,916 bp
Genomic location
Chr05:80,683,643–80,691,558
Strand
−
Open original Tripal record
Computational annotation

Functional evidence

These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.

eggNOG
4432.XP_010253205.1,O,[Geranylgeranyl transferase type-1 subunit]
Gene Ontology
Geranylgeranyl transferase type-1 subunit | GO:0001101//response to acid chemical; GO:0006464//cellular protein modification process; GO:0006807//nitrogen compound metabolic process; GO:0006950//response to stress; GO:0007275//multicellular organism development; GO:0008150//biological_process; GO:0008152//metabolic process; GO:0008284//positive regulation of cell proliferation; GO:0009414//response to water deprivation; GO:0009415//response to water; GO:0009555//pollen development; GO:0009628//response to abiotic stimulus; GO:0009719//response to endogenous stimulus; GO:0009725//response to hormone; GO:0009733//response to auxin; GO:0009737//response to abscisic acid; GO:0009787//regulation of abscisic acid-activated signaling pathway; GO:0009788//negative regulation of abscisic acid-activated signaling pathway; GO:0009889//regulation of biosynthetic process; GO:0009890//negative regulation of biosynthetic process; GO:0009892//negative regulation of metabolic process; GO:0009966//regulation of signal transduction; GO:0009968//negative regulation of signal transduction; GO:0009987//cellular process; GO:0010033//response to organic substance; GO:0010035//response to inorganic substance; GO:0010556//regulation of macromolecule biosynthetic process; GO:0010558//negative regulation of macromolecule biosynthetic process; GO:0010605//negative regulation of macromolecule metabolic process; GO:0010646//regulation of cell communication; GO:0010648//negative regulation of cell communication; GO:0018342//protein prenylation; GO:0018344//protein geranylgeranylation; GO:0019222//regulation of metabolic process; GO:0019538//protein metabolic process; GO:0022622//root system development; GO:0023051//regulation of signaling; GO:0023057//negative regulation of signaling; GO:0032501//multicellular organismal process; GO:0032502//developmental process; GO:0033993//response to lipid; GO:0034097//response to cytokine; GO:0036211//protein modification process; GO:0042127//regulation of cell proliferation; GO:0042221//response to chemical; GO:0043170//macromolecule metabolic process; GO:0043412//macromolecule modification; GO:0044237//cellular metabolic process; GO:0044238//primary metabolic process; GO:0044260//cellular macromolecule metabolic process; GO:0044267//cellular protein metabolic process; GO:0045787//positive regulation of cell cycle; GO:0048229//gametophyte development; GO:0048364//root development; GO:0048518//positive regulation of biological process; GO:0048519//negative regulation of biological process; GO:0048522//positive regulation of cellular process; GO:0048523//negative regulation of cellular process; GO:0048583//regulation of response to stimulus; GO:0048585//negative regulation of response to stimulus; GO:0048731//system development; GO:0048856//anatomical structure development; GO:0050789//regulation of biological process; GO:0050794//regulation of cellular process; GO:0050896//response to stimulus; GO:0051726//regulation of cell cycle; GO:0051769//regulation of nitric-oxide synthase biosynthetic process; GO:0051771//negative regulation of nitric-oxide synthase biosynthetic process; GO:0060255//regulation of macromolecule metabolic process; GO:0065007//biological regulation; GO:0071704//organic substance metabolic process; GO:0097305//response to alcohol; GO:0097354//prenylation; GO:0099402//plant organ development; GO:1901419//regulation of response to alcohol; GO:1901420//negative regulation of response to alcohol; GO:1901564//organonitrogen compound metabolic process; GO:1901700//response to oxygen-containing compound; GO:1905957//regulation of cellular response to alcohol; GO:1905958//negative regulation of cellular response to alcohol | GO:0005575//cellular_component; GO:0005622//intracellular; GO:0005623//cell; GO:0005737//cytoplasm; GO:0005829//cytosol; GO:0005953//CAAX-protein geranylgeranyltransferase complex; GO:0005968//Rab-protein geranylgeranyltransferase complex; GO:0032991//macromolecular complex; GO:0044424//intracellular part; GO:0044444//cytoplasmic part; GO:0044464//cell part; GO:1902494//catalytic complex; GO:1990234//transferase complex | GO:0003674//molecular_function; GO:0003824//catalytic activity; GO:0004659//prenyltransferase activity; GO:0004661//protein geranylgeranyltransferase activity; GO:0004662//CAAX-protein geranylgeranyltransferase activity; GO:0004663//Rab geranylgeranyltransferase activity; GO:0005488//binding; GO:0008270//zinc ion binding; GO:0008318//protein prenyltransferase activity; GO:0016740//transferase activity; GO:0016765//transferase activity, transferring alkyl or aryl (other than methyl) groups; GO:0043167//ion binding; GO:0043169//cation binding; GO:0046872//metal ion binding; GO:0046914//transition metal ion binding
KEGG
K11713 | PGTB1
NR
RWR81630.1 geranylgeranyl transferase type-1 subunit beta isoform X2 [Cinnamomum micranthum f. kanehirae]
Swiss-Prot
O80642.1 RecName: Full=Geranylgeranyl transferase type-1 subunit beta; AltName: Full=Geranylgeranyl transferase type I subunit beta; Short=AtGGT-IB; Short=GGTase-I-beta [Arabidopsis thaliana]
Biological context

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