Feature identity
- Identifier
- PaHa12g03250.1
- Feature type
- mRNA
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 756 bp
- Genomic location
- 12:15,190,700–15,191,600
- Strand
- −
Hass · mRNA
PaHa12g03250.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 756
- bp
- 12:15,190,700–15,191,600
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: PaHa12g03250
- eggNOG
- Preferred name: HSFA3 | Seed ortholog: 337451.A0A3S3R997 | COG: S | eggNOG OG: HSF_DNA-bind@131567|Dp-10, HSF_DNA-bind@3193|AWe-23, HSF_DNA-bind@33090|fZ-18, HSF_DNA-bind@3398|AhZ-24, HSF_DNA-bind@35493|uY-20
- Gene Ontology
- GO:0003677 DNA binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0006355 regulation of DNA-templated transcription; GO:0009408 response to heat
- KEGG
- KO: K09419 | BRITE: 00001, 03000
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePaHa12g03250.1-protein
derives_frommRNAPaHa12g03250.1
mRNAPaHa12g03250.1
part_ofgenePaHa12g03250
CDS
part_ofPaHa12g03250.1-CDS-12-1787993825:15190700..15190726mRNAPaHa12g03250.1
CDS
part_ofPaHa12g03250.1-CDS-12-1787993825:15190872..15191600mRNAPaHa12g03250.1
exon
part_ofPaHa12g03250.1-exon-12-1787993825:15190700..15190726mRNAPaHa12g03250.1
exon
part_ofPaHa12g03250.1-exon-12-1787993825:15190872..15191600mRNAPaHa12g03250.1
