Feature identity
- Identifier
- PaHa12g03130.1
- Feature type
- mRNA
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 1,101 bp
- Genomic location
- 12:14,782,633–14,794,698
- Strand
- −
Hass · mRNA
PaHa12g03130.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 1,101
- bp
- 12:14,782,633–14,794,698
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: PaHa12g03130
- eggNOG
- Preferred name: LOC116188565 | Seed ortholog: 29760.E0CR69 | eggNOG OG: AMP-binding|PC7SLE@131567, AMP-binding|PC7SLE@2759, AMP-binding|PC7SLE@3398
- Gene Ontology
- GO:0004467 long-chain fatty acid-CoA ligase activity; GO:0005739 mitochondrion; GO:0006631 fatty acid metabolic process; GO:0009507 chloroplast; GO:0009536 plastid; GO:0009941 chloroplast envelope
- KEGG
- EC: ec:6.2.1.3 | KO: K01897 | Pathway: 00061, 00071, 01100, 01212, 04146 | Module: M00086 | BRITE: 00001, 01000, 01004, 04147
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePaHa12g03130.1-protein
derives_frommRNAPaHa12g03130.1
mRNAPaHa12g03130.1
part_ofgenePaHa12g03130
CDS
part_ofPaHa12g03130.1-CDS-12-1787993825:14782633..14782908mRNAPaHa12g03130.1
CDS
part_ofPaHa12g03130.1-CDS-12-1787993825:14787725..14787805mRNAPaHa12g03130.1
CDS
part_ofPaHa12g03130.1-CDS-12-1787993825:14788180..14788607mRNAPaHa12g03130.1
CDS
part_ofPaHa12g03130.1-CDS-12-1787993825:14788697..14788717mRNAPaHa12g03130.1
CDS
part_ofPaHa12g03130.1-CDS-12-1787993825:14794148..14794350mRNAPaHa12g03130.1
CDS
part_ofPaHa12g03130.1-CDS-12-1787993825:14794607..14794698mRNAPaHa12g03130.1
exon
part_ofPaHa12g03130.1-exon-12-1787993825:14782633..14782908mRNAPaHa12g03130.1
exon
part_ofPaHa12g03130.1-exon-12-1787993825:14787725..14787805mRNAPaHa12g03130.1
exon
part_ofPaHa12g03130.1-exon-12-1787993825:14788180..14788607mRNAPaHa12g03130.1
exon
part_ofPaHa12g03130.1-exon-12-1787993825:14788697..14788717mRNAPaHa12g03130.1
exon
part_ofPaHa12g03130.1-exon-12-1787993825:14794148..14794350mRNAPaHa12g03130.1
exon
part_ofPaHa12g03130.1-exon-12-1787993825:14794607..14794698mRNAPaHa12g03130.1
