Feature identity
- Identifier
- PaHa12g03050.1
- Feature type
- mRNA
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 1,719 bp
- Genomic location
- 12:14,555,629–14,584,824
- Strand
- +
Hass · mRNA
PaHa12g03050.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 1,719
- bp
- 12:14,555,629–14,584,824
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: PaHa12g03050
- eggNOG
- Preferred name: ARF17 | Seed ortholog: 337451.A0A443Q2J5 | COG: S | eggNOG OG: Auxin_resp@131221|AX-8, Auxin_resp@131567|A-1*, Auxin_resp@2759|O-4, Auxin_resp@3398|CO-11, B3@131221|AHw-20, B3@131567|A-1*, B3@3193|BOq-25, B3@33090|Id-12
- Gene Ontology
- GO:0000987 cis-regulatory region sequence-specific DNA binding; GO:0003690 double-stranded DNA binding; GO:0003700 DNA-binding transcription factor activity; GO:0005634 nucleus; GO:0006355 regulation of DNA-templated transcription; GO:0009555 pollen development; GO:0009653 anatomical structure morphogenesis; GO:0009734 auxin-activated signaling pathway; GO:0010208 pollen wall assembly; GO:0048830 adventitious root development; GO:0052543 callose deposition in cell wall; GO:0120195 positive regulation of anther dehiscence
- KEGG
- KO: K14486 | Pathway: 04075 | BRITE: 00001
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePaHa12g03050.1-protein
derives_frommRNAPaHa12g03050.1
mRNAPaHa12g03050.1
part_ofgenePaHa12g03050
CDS
part_ofPaHa12g03050.1-CDS-12-1787993825:14555629..14556678mRNAPaHa12g03050.1
CDS
part_ofPaHa12g03050.1-CDS-12-1787993825:14582985..14583597mRNAPaHa12g03050.1
CDS
part_ofPaHa12g03050.1-CDS-12-1787993825:14583701..14583730mRNAPaHa12g03050.1
CDS
part_ofPaHa12g03050.1-CDS-12-1787993825:14584799..14584824mRNAPaHa12g03050.1
exon
part_ofPaHa12g03050.1-exon-12-1787993825:14555629..14556678mRNAPaHa12g03050.1
exon
part_ofPaHa12g03050.1-exon-12-1787993825:14582985..14583597mRNAPaHa12g03050.1
exon
part_ofPaHa12g03050.1-exon-12-1787993825:14583701..14583730mRNAPaHa12g03050.1
exon
part_ofPaHa12g03050.1-exon-12-1787993825:14584799..14584824mRNAPaHa12g03050.1
