Feature identity
- Identifier
- PaHa12g00930.1
- Feature type
- mRNA
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 447 bp
- Genomic location
- 12:4,904,861–4,913,911
- Strand
- −
Hass · mRNA
PaHa12g00930.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 447
- bp
- 12:4,904,861–4,913,911
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: PaHa12g00930
- eggNOG
- Preferred name: NFYB3 | Seed ortholog: 337451.A0A3S3RB14 | COG: COG2036 | eggNOG OG: CBFD_NFYB_HMF@131567|BS-10, CBFD_NFYB_HMF@2759|ID-16
- Gene Ontology
- GO:0000785 chromatin; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005575 cellular_component; GO:0005634 nucleus; GO:0005829 cytosol; GO:0006355 regulation of DNA-templated transcription; GO:0008622 epsilon DNA polymerase complex; GO:0008623 CHRAC; GO:0009408 response to heat; GO:0009414 response to water deprivation; GO:0043596 nuclear replication fork; GO:0140672 ATAC complex
- KEGG
- EC: ec:2.7.7.7 | KO: K02326 | Pathway: 03030, 03082, 03410, 03420 | BRITE: 00001, 01000, 03032, 03036, 03400
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePaHa12g00930.1-protein
derives_frommRNAPaHa12g00930.1
mRNAPaHa12g00930.1
part_ofgenePaHa12g00930
CDS
part_ofPaHa12g00930.1-CDS-12-1787993825:4904861..4905018mRNAPaHa12g00930.1
CDS
part_ofPaHa12g00930.1-CDS-12-1787993825:4912838..4912956mRNAPaHa12g00930.1
CDS
part_ofPaHa12g00930.1-CDS-12-1787993825:4913742..4913911mRNAPaHa12g00930.1
exon
part_ofPaHa12g00930.1-exon-12-1787993825:4904861..4905018mRNAPaHa12g00930.1
exon
part_ofPaHa12g00930.1-exon-12-1787993825:4912838..4912956mRNAPaHa12g00930.1
exon
part_ofPaHa12g00930.1-exon-12-1787993825:4913742..4913911mRNAPaHa12g00930.1
