Anise · gene

Chr08.g58246

A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.

16,277
bp
Chr08:6,767,546–6,783,822
genomic location
Record overview

Feature identity

Identifier
Chr08.g58246
Feature type
gene
Genome collection
Anise
Organism
Persea americana-Anise
Sequence length
16,277 bp
Genomic location
Chr08:6,767,546–6,783,822
Strand
−
Open original Tripal record
Computational annotation

Functional evidence

These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.

eggNOG
42345.XP_008777803.1,I,[This enzyme condenses acetyl-CoA with acetoacetyl-CoA to form HMG-CoA, which is the substrate for HMG-CoA reductase]
Gene Ontology
This enzyme condenses acetyl-CoA with acetoacetyl-CoA to form HMG-CoA, which is the substrate for HMG-CoA reductase | GO:0006084//acetyl-CoA metabolic process; GO:0006139//nucleobase-containing compound metabolic process; GO:0006163//purine nucleotide metabolic process; GO:0006629//lipid metabolic process; GO:0006637//acyl-CoA metabolic process; GO:0006644//phospholipid metabolic process; GO:0006720//isoprenoid metabolic process; GO:0006725//cellular aromatic compound metabolic process; GO:0006732//coenzyme metabolic process; GO:0006753//nucleoside phosphate metabolic process; GO:0006790//sulfur compound metabolic process; GO:0006793//phosphorus metabolic process; GO:0006796//phosphate-containing compound metabolic process; GO:0006807//nitrogen compound metabolic process; GO:0008150//biological_process; GO:0008152//metabolic process; GO:0008299//isoprenoid biosynthetic process; GO:0008610//lipid biosynthetic process; GO:0008654//phospholipid biosynthetic process; GO:0009058//biosynthetic process; GO:0009117//nucleotide metabolic process; GO:0009150//purine ribonucleotide metabolic process; GO:0009240//isopentenyl diphosphate biosynthetic process; GO:0009259//ribonucleotide metabolic process; GO:0009987//cellular process; GO:0019287//isopentenyl diphosphate biosynthetic process, mevalonate pathway; GO:0019637//organophosphate metabolic process; GO:0019693//ribose phosphate metabolic process; GO:0033865//nucleoside bisphosphate metabolic process; GO:0033875//ribonucleoside bisphosphate metabolic process; GO:0034032//purine nucleoside bisphosphate metabolic process; GO:0034641//cellular nitrogen compound metabolic process; GO:0035383//thioester metabolic process; GO:0043603//cellular amide metabolic process; GO:0044237//cellular metabolic process; GO:0044238//primary metabolic process; GO:0044249//cellular biosynthetic process; GO:0044255//cellular lipid metabolic process; GO:0044281//small molecule metabolic process; GO:0046483//heterocycle metabolic process; GO:0046490//isopentenyl diphosphate metabolic process; GO:0051186//cofactor metabolic process; GO:0055086//nucleobase-containing small molecule metabolic process; GO:0071704//organic substance metabolic process; GO:0072521//purine-containing compound metabolic process; GO:0090407//organophosphate biosynthetic process; GO:1901135//carbohydrate derivative metabolic process; GO:1901360//organic cyclic compound metabolic process; GO:1901564//organonitrogen compound metabolic process; GO:1901576//organic substance biosynthetic process | GO:0005575//cellular_component; GO:0005622//intracellular; GO:0005623//cell; GO:0005737//cytoplasm; GO:0005829//cytosol; GO:0005911//cell-cell junction; GO:0009506//plasmodesma; GO:0030054//cell junction; GO:0044424//intracellular part; GO:0044444//cytoplasmic part; GO:0044464//cell part; GO:0055044//symplast | GO:0003674//molecular_function; GO:0003824//catalytic activity; GO:0004421//hydroxymethylglutaryl-CoA synthase activity; GO:0016740//transferase activity; GO:0016746//transferase activity, transferring acyl groups; GO:0046912//transferase activity, transferring acyl groups, acyl groups converted into alkyl on transfer
KEGG
K01641 | E2.3.3.10
NR
RWR87580.1 hydroxymethylglutaryl-CoA synthase-like protein isoform X1 [Cinnamomum micranthum f. kanehirae]
Swiss-Prot
P54873.2 RecName: Full=Hydroxymethylglutaryl-CoA synthase; Short=HMG-CoA synthase; AltName: Full=3-hydroxy-3-methylglutaryl coenzyme A synthase; AltName: Full=Protein EMBRYO DEFECTIVE 2778; AltName: Full=Protein FLAKY POLLEN 1 [Arabidopsis thaliana]
Biological context

Connected feature records

Follow parent–child relationships among genes, transcripts, coding regions, and protein products.