Feature identity
- Identifier
- PaHa12g00840.1
- Feature type
- mRNA
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 978 bp
- Genomic location
- 12:4,540,746–4,544,360
- Strand
- −
Hass · mRNA
PaHa12g00840.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 978
- bp
- 12:4,540,746–4,544,360
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: PaHa12g00840
- eggNOG
- Preferred name: WRKY21 | Seed ortholog: 337451.A0A3S3QTG6 | COG: S | eggNOG OG: Plant_zn_clust@131567|A-1*, Plant_zn_clust@3193|I-4, Plant_zn_clust@3398|By-10, WRKY@131567|A-1*, WRKY@2759|CB-10, WRKY@3193|AGq-23, WRKY@33090|Ic-14, WRKY@3398|AOc-24
- Gene Ontology
- GO:0000976 transcription cis-regulatory region binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005516 calmodulin binding; GO:0005634 nucleus; GO:0019760 glucosinolate metabolic process
- KEGG
- KO: K13425 | Pathway: 04016, 04626 | BRITE: 00001, 03000
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePaHa12g00840.1-protein
derives_frommRNAPaHa12g00840.1
mRNAPaHa12g00840.1
part_ofgenePaHa12g00840
CDS
part_ofPaHa12g00840.1-CDS-12-1787993825:4540746..4540890mRNAPaHa12g00840.1
CDS
part_ofPaHa12g00840.1-CDS-12-1787993825:4543421..4543546mRNAPaHa12g00840.1
CDS
part_ofPaHa12g00840.1-CDS-12-1787993825:4543654..4544360mRNAPaHa12g00840.1
exon
part_ofPaHa12g00840.1-exon-12-1787993825:4540746..4540890mRNAPaHa12g00840.1
exon
part_ofPaHa12g00840.1-exon-12-1787993825:4543421..4543546mRNAPaHa12g00840.1
exon
part_ofPaHa12g00840.1-exon-12-1787993825:4543654..4544360mRNAPaHa12g00840.1
