Feature identity
- Identifier
- PaHa12g00090.1
- Feature type
- mRNA
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 1,470 bp
- Genomic location
- 12:985,042–1,006,039
- Strand
- +
Hass · mRNA
PaHa12g00090.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 1,470
- bp
- 12:985,042–1,006,039
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: PaHa12g00090
- eggNOG
- Preferred name: E2FB | Seed ortholog: 337451.A0A443Q243 | COG: S | eggNOG OG: E2F_CC-MB@131567|A-1*, E2F_CC-MB@2759|B-2, E2F_CC-MB@3398|IS-15, E2F_TDP@131567|Af-9, E2F_TDP@3193|bj-27
- Gene Ontology
- GO:0003677 DNA binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0005737 cytoplasm; GO:0008284 positive regulation of cell population proliferation; GO:0009733 response to auxin; GO:0010090 trichome morphogenesis; GO:0012501 programmed cell death; GO:0045893 positive regulation of DNA-templated transcription; GO:0051302 regulation of cell division; GO:0051446 positive regulation of meiotic cell cycle; GO:0051726 regulation of cell cycle; GO:0070176 DRM complex; GO:0140612 DNA damage sensor activity
- KEGG
- KO: K06620 | Pathway: 01522, 03083, 04110, 04137, 04218, 04350, 04934, 05160, 05161, 05163, 05165, 05166, 05167, 05169, 05200, 05206, 05207, 05212, 05214, 05215, 05218, 05219, 05220, 05222, 05223, 05224, 05225, 05226 | BRITE: 00001, 03000
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePaHa12g00090.1-protein
derives_frommRNAPaHa12g00090.1
mRNAPaHa12g00090.1
part_ofgenePaHa12g00090
CDS
part_ofPaHa12g00090.1-CDS-12-1787993825:1001538..1001597mRNAPaHa12g00090.1
CDS
part_ofPaHa12g00090.1-CDS-12-1787993825:1001787..1001872mRNAPaHa12g00090.1
CDS
part_ofPaHa12g00090.1-CDS-12-1787993825:1001947..1002035mRNAPaHa12g00090.1
CDS
part_ofPaHa12g00090.1-CDS-12-1787993825:1002143..1002215mRNAPaHa12g00090.1
CDS
part_ofPaHa12g00090.1-CDS-12-1787993825:1003521..1003573mRNAPaHa12g00090.1
CDS
part_ofPaHa12g00090.1-CDS-12-1787993825:1003679..1003729mRNAPaHa12g00090.1
CDS
part_ofPaHa12g00090.1-CDS-12-1787993825:1003814..1003862mRNAPaHa12g00090.1
CDS
part_ofPaHa12g00090.1-CDS-12-1787993825:1004011..1004076mRNAPaHa12g00090.1
CDS
part_ofPaHa12g00090.1-CDS-12-1787993825:1004170..1004246mRNAPaHa12g00090.1
CDS
part_ofPaHa12g00090.1-CDS-12-1787993825:1004693..1004924mRNAPaHa12g00090.1
CDS
part_ofPaHa12g00090.1-CDS-12-1787993825:1005770..1005833mRNAPaHa12g00090.1
CDS
part_ofPaHa12g00090.1-CDS-12-1787993825:1005918..1006039mRNAPaHa12g00090.1
CDS
part_ofPaHa12g00090.1-CDS-12-1787993825:985042..985260mRNAPaHa12g00090.1
CDS
part_ofPaHa12g00090.1-CDS-12-1787993825:994511..994564mRNAPaHa12g00090.1
CDS
part_ofPaHa12g00090.1-CDS-12-1787993825:994845..995019mRNAPaHa12g00090.1
exon
part_ofPaHa12g00090.1-exon-12-1787993825:1001538..1001597mRNAPaHa12g00090.1
exon
part_ofPaHa12g00090.1-exon-12-1787993825:1001787..1001872mRNAPaHa12g00090.1
exon
part_ofPaHa12g00090.1-exon-12-1787993825:1001947..1002035mRNAPaHa12g00090.1
exon
part_ofPaHa12g00090.1-exon-12-1787993825:1002143..1002215mRNAPaHa12g00090.1
exon
part_ofPaHa12g00090.1-exon-12-1787993825:1003521..1003573mRNAPaHa12g00090.1
exon
part_ofPaHa12g00090.1-exon-12-1787993825:1003679..1003729mRNAPaHa12g00090.1
exon
part_ofPaHa12g00090.1-exon-12-1787993825:1003814..1003862mRNAPaHa12g00090.1
exon
part_ofPaHa12g00090.1-exon-12-1787993825:1004011..1004076mRNAPaHa12g00090.1
exon
part_ofPaHa12g00090.1-exon-12-1787993825:1004170..1004246mRNAPaHa12g00090.1
exon
part_ofPaHa12g00090.1-exon-12-1787993825:1004693..1004924mRNAPaHa12g00090.1
exon
part_ofPaHa12g00090.1-exon-12-1787993825:1005770..1005833mRNAPaHa12g00090.1
exon
part_ofPaHa12g00090.1-exon-12-1787993825:1005918..1006039mRNAPaHa12g00090.1
exon
part_ofPaHa12g00090.1-exon-12-1787993825:985042..985260mRNAPaHa12g00090.1
exon
part_ofPaHa12g00090.1-exon-12-1787993825:994511..994564mRNAPaHa12g00090.1
exon
part_ofPaHa12g00090.1-exon-12-1787993825:994845..995019mRNAPaHa12g00090.1
