Feature identity
- Identifier
- PaHa11g22320.1
- Feature type
- mRNA
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 795 bp
- Genomic location
- 11:54,827,010–54,851,896
- Strand
- +
Hass · mRNA
PaHa11g22320.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 795
- bp
- 11:54,827,010–54,851,896
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: PaHa11g22320
- eggNOG
- Preferred name: LOC123094739 | Seed ortholog: 337451.A0A443PT27 | COG: S | eggNOG OG: SRF-TF@131567|A-1*, SRF-TF@1437183|CEp-29, SRF-TF@2759|C-2!, SRF-TF@3398|AOO-23, SRF-TF@58023|ai-19
- Gene Ontology
- GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0009555 pollen development; GO:0010152 pollen maturation; GO:0080092 regulation of pollen tube growth
- KEGG
- KO: K04378, K04454, K09260, K09261, K09262, K09264, K09265, K12412, K19807, K19808, K27808 | Pathway: 04010, 04011, 04013, 04022, 04111, 04371, 04921, 04928, 05166, 05202, 05203, 05418 | BRITE: 00001, 03000, 03021, 04131
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePaHa11g22320.1-protein
derives_frommRNAPaHa11g22320.1
mRNAPaHa11g22320.1
part_ofgenePaHa11g22320
CDS
part_ofPaHa11g22320.1-CDS-11-1787993825:54827010..54827194mRNAPaHa11g22320.1
CDS
part_ofPaHa11g22320.1-CDS-11-1787993825:54828073..54828132mRNAPaHa11g22320.1
CDS
part_ofPaHa11g22320.1-CDS-11-1787993825:54828234..54828252mRNAPaHa11g22320.1
CDS
part_ofPaHa11g22320.1-CDS-11-1787993825:54828396..54828460mRNAPaHa11g22320.1
CDS
part_ofPaHa11g22320.1-CDS-11-1787993825:54828587..54828602mRNAPaHa11g22320.1
CDS
part_ofPaHa11g22320.1-CDS-11-1787993825:54828697..54828758mRNAPaHa11g22320.1
CDS
part_ofPaHa11g22320.1-CDS-11-1787993825:54845567..54845663mRNAPaHa11g22320.1
CDS
part_ofPaHa11g22320.1-CDS-11-1787993825:54846650..54846697mRNAPaHa11g22320.1
CDS
part_ofPaHa11g22320.1-CDS-11-1787993825:54846809..54846936mRNAPaHa11g22320.1
CDS
part_ofPaHa11g22320.1-CDS-11-1787993825:54851782..54851896mRNAPaHa11g22320.1
exon
part_ofPaHa11g22320.1-exon-11-1787993825:54827010..54827194mRNAPaHa11g22320.1
exon
part_ofPaHa11g22320.1-exon-11-1787993825:54828073..54828132mRNAPaHa11g22320.1
exon
part_ofPaHa11g22320.1-exon-11-1787993825:54828234..54828252mRNAPaHa11g22320.1
exon
part_ofPaHa11g22320.1-exon-11-1787993825:54828396..54828460mRNAPaHa11g22320.1
exon
part_ofPaHa11g22320.1-exon-11-1787993825:54828587..54828602mRNAPaHa11g22320.1
exon
part_ofPaHa11g22320.1-exon-11-1787993825:54828697..54828758mRNAPaHa11g22320.1
exon
part_ofPaHa11g22320.1-exon-11-1787993825:54845567..54845663mRNAPaHa11g22320.1
exon
part_ofPaHa11g22320.1-exon-11-1787993825:54846650..54846697mRNAPaHa11g22320.1
exon
part_ofPaHa11g22320.1-exon-11-1787993825:54846809..54846936mRNAPaHa11g22320.1
exon
part_ofPaHa11g22320.1-exon-11-1787993825:54851782..54851896mRNAPaHa11g22320.1
