Feature identity
- Identifier
- PaHa11g21380.1
- Feature type
- mRNA
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 1,722 bp
- Genomic location
- 11:53,563,145–53,567,888
- Strand
- +
Hass · mRNA
PaHa11g21380.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 1,722
- bp
- 11:53,563,145–53,567,888
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: PaHa11g21380
- eggNOG
- Preferred name: AO | Seed ortholog: 337451.A0A3S3QZE0 | COG: COG2132 | eggNOG OG: Cu-oxidase@131567|A-1, Cu-oxidase@1437183|BRA-21, Cu-oxidase@2759|v-6, Cu-oxidase@3193|dM-15, Cu-oxidase@3398|ALe-18, Cu-oxidase@35493|Ku-12, Cu-oxidase_2@131567|z-6, Cu-oxidase_2@2759|Wm-16, Cu-oxidase_2@3193|BDp-23, Cu-oxidase_3@131567|C-2!, Cu-oxidase_3@2759|Aw-9, Cu-oxidase_3@3193|OT-15
- Gene Ontology
- GO:0004097 catechol oxidase activity; GO:0004322 ferroxidase activity; GO:0004503 tyrosinase activity; GO:0005576 extracellular region; GO:0008447 L-ascorbate oxidase activity; GO:0009897 external side of plasma membrane; GO:0009986 cell surface; GO:0016682 oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor; GO:0040003 chitin-based cuticle development; GO:0045178 basal part of cell; GO:0055070 copper ion homeostasis; GO:0098711 iron ion import across plasma membrane
- KEGG
- EC: ec:1.10.3.3 | KO: K00423 | Pathway: 00053, 01100 | BRITE: 00001, 01000
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePaHa11g21380.1-protein
derives_frommRNAPaHa11g21380.1
mRNAPaHa11g21380.1
part_ofgenePaHa11g21380
CDS
part_ofPaHa11g21380.1-CDS-11-1787993825:53563145..53563426mRNAPaHa11g21380.1
CDS
part_ofPaHa11g21380.1-CDS-11-1787993825:53563629..53563721mRNAPaHa11g21380.1
CDS
part_ofPaHa11g21380.1-CDS-11-1787993825:53565567..53565779mRNAPaHa11g21380.1
CDS
part_ofPaHa11g21380.1-CDS-11-1787993825:53566626..53566808mRNAPaHa11g21380.1
CDS
part_ofPaHa11g21380.1-CDS-11-1787993825:53566938..53567888mRNAPaHa11g21380.1
exon
part_ofPaHa11g21380.1-exon-11-1787993825:53563145..53563426mRNAPaHa11g21380.1
exon
part_ofPaHa11g21380.1-exon-11-1787993825:53563629..53563721mRNAPaHa11g21380.1
exon
part_ofPaHa11g21380.1-exon-11-1787993825:53565567..53565779mRNAPaHa11g21380.1
exon
part_ofPaHa11g21380.1-exon-11-1787993825:53566626..53566808mRNAPaHa11g21380.1
exon
part_ofPaHa11g21380.1-exon-11-1787993825:53566938..53567888mRNAPaHa11g21380.1
