Anise · gene

Chr12.g81269

A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.

22,313
bp
Chr12:28,100,605–28,122,917
genomic location
Record overview

Feature identity

Identifier
Chr12.g81269
Feature type
gene
Genome collection
Anise
Organism
Persea americana-Anise
Sequence length
22,313 bp
Genomic location
Chr12:28,100,605–28,122,917
Strand
+
Open original Tripal record
Computational annotation

Functional evidence

These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.

eggNOG
4432.XP_010248779.1,K,[lysine-specific demethylase]
Gene Ontology
lysine-specific demethylase | GO:0000003//reproduction; GO:0000902//cell morphogenesis; GO:0003006//developmental process involved in reproduction; GO:0006325//chromatin organization; GO:0006464//cellular protein modification process; GO:0006482//protein demethylation; GO:0006807//nitrogen compound metabolic process; GO:0006996//organelle organization; GO:0007275//multicellular organism development; GO:0008150//biological_process; GO:0008152//metabolic process; GO:0008214//protein dealkylation; GO:0009653//anatomical structure morphogenesis; GO:0009719//response to endogenous stimulus; GO:0009725//response to hormone; GO:0009741//response to brassinosteroid; GO:0009791//post-embryonic development; GO:0009826//unidimensional cell growth; GO:0009892//negative regulation of metabolic process; GO:0009987//cellular process; GO:0010033//response to organic substance; GO:0010228//vegetative to reproductive phase transition of meristem; GO:0010605//negative regulation of macromolecule metabolic process; GO:0010639//negative regulation of organelle organization; GO:0014070//response to organic cyclic compound; GO:0016043//cellular component organization; GO:0016049//cell growth; GO:0016569//covalent chromatin modification; GO:0016570//histone modification; GO:0016577//histone demethylation; GO:0019222//regulation of metabolic process; GO:0019538//protein metabolic process; GO:0022414//reproductive process; GO:0031056//regulation of histone modification; GO:0031057//negative regulation of histone modification; GO:0031323//regulation of cellular metabolic process; GO:0031324//negative regulation of cellular metabolic process; GO:0031399//regulation of protein modification process; GO:0031400//negative regulation of protein modification process; GO:0032268//regulation of cellular protein metabolic process; GO:0032269//negative regulation of cellular protein metabolic process; GO:0032501//multicellular organismal process; GO:0032502//developmental process; GO:0032989//cellular component morphogenesis; GO:0033043//regulation of organelle organization; GO:0033044//regulation of chromosome organization; GO:0033169//histone H3-K9 demethylation; GO:0033993//response to lipid; GO:0035065//regulation of histone acetylation; GO:0035067//negative regulation of histone acetylation; GO:0036211//protein modification process; GO:0040007//growth; GO:0042221//response to chemical; GO:0043170//macromolecule metabolic process; GO:0043412//macromolecule modification; GO:0044237//cellular metabolic process; GO:0044238//primary metabolic process; GO:0044260//cellular macromolecule metabolic process; GO:0044267//cellular protein metabolic process; GO:0048366//leaf development; GO:0048367//shoot system development; GO:0048519//negative regulation of biological process; GO:0048523//negative regulation of cellular process; GO:0048589//developmental growth; GO:0048608//reproductive structure development; GO:0048731//system development; GO:0048827//phyllome development; GO:0048856//anatomical structure development; GO:0048869//cellular developmental process; GO:0050789//regulation of biological process; GO:0050794//regulation of cellular process; GO:0050896//response to stimulus; GO:0051128//regulation of cellular component organization; GO:0051129//negative regulation of cellular component organization; GO:0051171//regulation of nitrogen compound metabolic process; GO:0051172//negative regulation of nitrogen compound metabolic process; GO:0051246//regulation of protein metabolic process; GO:0051248//negative regulation of protein metabolic process; GO:0051276//chromosome organization; GO:0060255//regulation of macromolecule metabolic process; GO:0060560//developmental growth involved in morphogenesis; GO:0061458//reproductive system development; GO:0065007//biological regulation; GO:0070076//histone lysine demethylation; GO:0070988//demethylation; GO:0071704//organic substance metabolic process; GO:0071840//cellular component organization or biogenesis; GO:0080090//regulation of primary metabolic process; GO:0099402//plant organ development; GO:1901564//organonitrogen compound metabolic process; GO:1901700//response to oxygen-containing compound; GO:1901983//regulation of protein acetylation; GO:1901984//negative regulation of protein acetylation; GO:1902275//regulation of chromatin organization; GO:1905268//negative regulation of chromatin organization; GO:2000756//regulation of peptidyl-lysine acetylation; GO:2000757//negative regulation of peptidyl-lysine acetylation; GO:2001251//negative regulation of chromosome organization | GO:0005575//cellular_component; GO:0005622//intracellular; GO:0005623//cell; GO:0005634//nucleus; GO:0043226//organelle; GO:0043227//membrane-bounded organelle; GO:0043229//intracellular organelle; GO:0043231//intracellular membrane-bounded organelle; GO:0044424//intracellular part; GO:0044464//cell part | -
NR
RWR96955.1 lysine-specific demethylase REF6-like protein [Cinnamomum micranthum f. kanehirae]
Swiss-Prot
Q9STM3.1 RecName: Full=Lysine-specific demethylase REF6; AltName: Full=Jumonji domain-containing protein 12; AltName: Full=Lysine-specific histone demethylase REF6; AltName: Full=Protein RELATIVE OF EARLY FLOWERING 6 [Arabidopsis thaliana]
Biological context

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