PaHa11g18600.1

Hass · mRNA

PaHa11g18600.1

A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.

828
bp
11:49,525,054–49,530,112
genomic location
Record overview

Feature identity

Identifier
PaHa11g18600.1
Feature type
mRNA
Genome collection
Hass
Organism
Persea americana-Hass
Sequence length
828 bp
Genomic location
11:49,525,054–49,530,112
Strand
+
Open original Tripal record
Computational annotation

Functional evidence

These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.

Functional index matched identifier: PaHa11g18600

eggNOG
Preferred name: SCL1 | Seed ortholog: 337451.A0A3S3NRA8 | COG: S | eggNOG OG: GRAS@131567|n-8, GRAS@3193|AY-10, GRAS@3398|BH-11
Gene Ontology
GO:0000976 transcription cis-regulatory region binding; GO:0003700 DNA-binding transcription factor activity; GO:0005634 nucleus; GO:0006355 regulation of DNA-templated transcription
KEGG
KO: K27748 | BRITE: 00001, 03000
Biological context

Connected feature records

Follow parent–child relationships among genes, transcripts, coding regions, and protein products.

CDSPaHa11g18600.1-CDS-11-1787993825:49525054..49525057
part_of
CDSPaHa11g18600.1-CDS-11-1787993825:49527622..49527655
part_of
CDSPaHa11g18600.1-CDS-11-1787993825:49527781..49527976
part_of
CDSPaHa11g18600.1-CDS-11-1787993825:49528052..49528559
part_of
CDSPaHa11g18600.1-CDS-11-1787993825:49530027..49530112
part_of
exonPaHa11g18600.1-exon-11-1787993825:49525054..49525057
part_of
exonPaHa11g18600.1-exon-11-1787993825:49527622..49527655
part_of
exonPaHa11g18600.1-exon-11-1787993825:49527781..49527976
part_of
exonPaHa11g18600.1-exon-11-1787993825:49528052..49528559
part_of
exonPaHa11g18600.1-exon-11-1787993825:49530027..49530112
part_of
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