Anise · gene

Chr01.g01484

A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.

89,616
bp
Chr01:17,293,048–17,382,663
genomic location
Record overview

Feature identity

Identifier
Chr01.g01484
Feature type
gene
Genome collection
Anise
Organism
Persea americana-Anise
Sequence length
89,616 bp
Genomic location
Chr01:17,293,048–17,382,663
Strand
−
Open original Tripal record
Computational annotation

Functional evidence

These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.

eggNOG
4432.XP_010265650.1,KL,[CHD3-type chromatin-remodeling factor]
Gene Ontology
CHD3-type chromatin-remodeling factor | GO:0001101//response to acid chemical; GO:0006325//chromatin organization; GO:0006338//chromatin remodeling; GO:0006355//regulation of transcription, DNA-templated; GO:0006996//organelle organization; GO:0007154//cell communication; GO:0007165//signal transduction; GO:0007275//multicellular organism development; GO:0008150//biological_process; GO:0008283//cell proliferation; GO:0009719//response to endogenous stimulus; GO:0009725//response to hormone; GO:0009733//response to auxin; GO:0009735//response to cytokinin; GO:0009736//cytokinin-activated signaling pathway; GO:0009739//response to gibberellin; GO:0009755//hormone-mediated signaling pathway; GO:0009787//regulation of abscisic acid-activated signaling pathway; GO:0009788//negative regulation of abscisic acid-activated signaling pathway; GO:0009889//regulation of biosynthetic process; GO:0009890//negative regulation of biosynthetic process; GO:0009892//negative regulation of metabolic process; GO:0009966//regulation of signal transduction; GO:0009968//negative regulation of signal transduction; GO:0009987//cellular process; GO:0010033//response to organic substance; GO:0010468//regulation of gene expression; GO:0010556//regulation of macromolecule biosynthetic process; GO:0010558//negative regulation of macromolecule biosynthetic process; GO:0010605//negative regulation of macromolecule metabolic process; GO:0010629//negative regulation of gene expression; GO:0010646//regulation of cell communication; GO:0010648//negative regulation of cell communication; GO:0016043//cellular component organization; GO:0019219//regulation of nucleobase-containing compound metabolic process; GO:0019222//regulation of metabolic process; GO:0022622//root system development; GO:0023051//regulation of signaling; GO:0023052//signaling; GO:0023057//negative regulation of signaling; GO:0031323//regulation of cellular metabolic process; GO:0031324//negative regulation of cellular metabolic process; GO:0031326//regulation of cellular biosynthetic process; GO:0031327//negative regulation of cellular biosynthetic process; GO:0032501//multicellular organismal process; GO:0032502//developmental process; GO:0032870//cellular response to hormone stimulus; GO:0033993//response to lipid; GO:0042221//response to chemical; GO:0045892//negative regulation of transcription, DNA-templated; GO:0045934//negative regulation of nucleobase-containing compound metabolic process; GO:0048364//root development; GO:0048519//negative regulation of biological process; GO:0048523//negative regulation of cellular process; GO:0048580//regulation of post-embryonic development; GO:0048583//regulation of response to stimulus; GO:0048585//negative regulation of response to stimulus; GO:0048731//system development; GO:0048856//anatomical structure development; GO:0050789//regulation of biological process; GO:0050793//regulation of developmental process; GO:0050794//regulation of cellular process; GO:0050896//response to stimulus; GO:0051171//regulation of nitrogen compound metabolic process; GO:0051172//negative regulation of nitrogen compound metabolic process; GO:0051239//regulation of multicellular organismal process; GO:0051252//regulation of RNA metabolic process; GO:0051253//negative regulation of RNA metabolic process; GO:0051276//chromosome organization; GO:0051716//cellular response to stimulus; GO:0060255//regulation of macromolecule metabolic process; GO:0065007//biological regulation; GO:0070887//cellular response to chemical stimulus; GO:0071310//cellular response to organic substance; GO:0071368//cellular response to cytokinin stimulus; GO:0071495//cellular response to endogenous stimulus; GO:0071840//cellular component organization or biogenesis; GO:0080090//regulation of primary metabolic process; GO:0099402//plant organ development; GO:1901419//regulation of response to alcohol; GO:1901420//negative regulation of response to alcohol; GO:1901700//response to oxygen-containing compound; GO:1902679//negative regulation of RNA biosynthetic process; GO:1903506//regulation of nucleic acid-templated transcription; GO:1903507//negative regulation of nucleic acid-templated transcription; GO:1905957//regulation of cellular response to alcohol; GO:1905958//negative regulation of cellular response to alcohol; GO:2000023//regulation of lateral root development; GO:2000026//regulation of multicellular organismal development; GO:2000069//regulation of post-embryonic root development; GO:2000112//regulation of cellular macromolecule biosynthetic process; GO:2000113//negative regulation of cellular macromolecule biosynthetic process; GO:2000280//regulation of root development; GO:2001141//regulation of RNA biosynthetic process | GO:0005575//cellular_component; GO:0005622//intracellular; GO:0005623//cell; GO:0005634//nucleus; GO:0043226//organelle; GO:0043227//membrane-bounded organelle; GO:0043229//intracellular organelle; GO:0043231//intracellular membrane-bounded organelle; GO:0044424//intracellular part; GO:0044464//cell part | GO:0003674//molecular_function; GO:0003676//nucleic acid binding; GO:0003677//DNA binding; GO:0005488//binding; GO:0097159//organic cyclic compound binding; GO:1901363//heterocyclic compound binding
KEGG
K11643 | CHD4, MI2B
NR
RWR79379.1 CHD3-type chromatin-remodeling factor PICKLE [Cinnamomum micranthum f. kanehirae]
Swiss-Prot
Q9S775.1 RecName: Full=CHD3-type chromatin-remodeling factor PICKLE; AltName: Full=Protein CHROMATIN REMODELING 6; Short=AtCHR6; AltName: Full=Protein GYMNOS [Arabidopsis thaliana]
Biological context

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