Feature identity
- Identifier
- PaHa11g17970.1
- Feature type
- mRNA
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 687 bp
- Genomic location
- 11:48,623,293–48,623,979
- Strand
- +
Hass · mRNA
PaHa11g17970.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 687
- bp
- 11:48,623,293–48,623,979
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: PaHa11g17970
- eggNOG
- Preferred name: AGL80 | Seed ortholog: 337451.A0A443PPP8 | COG: S | eggNOG OG: SRF-TF@131567|A-1*, SRF-TF@2759|C-2!, SRF-TF@3398|gg-20
- Gene Ontology
- GO:0000976 transcription cis-regulatory region binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0009793 embryo development ending in seed dormancy; GO:0043078 polar nucleus; GO:0090406 pollen tube
- KEGG
- KO: K04378, K04454, K09260, K09261, K09262, K09264, K09265, K12412, K19807, K19808, K27808 | Pathway: 04010, 04011, 04013, 04022, 04111, 04371, 04921, 04928, 05166, 05202, 05203, 05418 | BRITE: 00001, 03000, 03021, 04131
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePaHa11g17970.1-protein
derives_frommRNAPaHa11g17970.1
mRNAPaHa11g17970.1
part_ofgenePaHa11g17970
CDS
part_ofPaHa11g17970.1-CDS-11-1787993825:48623293..48623979mRNAPaHa11g17970.1
exon
part_ofPaHa11g17970.1-exon-11-1787993825:48623293..48623979mRNAPaHa11g17970.1
