Anise · gene

Chr01.g02368

A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.

23,775
bp
Chr01:28,491,505–28,515,279
genomic location
Record overview

Feature identity

Identifier
Chr01.g02368
Feature type
gene
Genome collection
Anise
Organism
Persea americana-Anise
Sequence length
23,775 bp
Genomic location
Chr01:28,491,505–28,515,279
Strand
−
Open original Tripal record
Computational annotation

Functional evidence

These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.

eggNOG
4155.Migut.N02363.1.p,S,[Phytochromobilin]
Gene Ontology
Phytochromobilin | GO:0007154//cell communication; GO:0007165//signal transduction; GO:0008150//biological_process; GO:0008152//metabolic process; GO:0009987//cellular process; GO:0010019//chloroplast-nucleus signaling pathway; GO:0023052//signaling; GO:0050789//regulation of biological process; GO:0050794//regulation of cellular process; GO:0050896//response to stimulus; GO:0051716//cellular response to stimulus; GO:0055114//oxidation-reduction process; GO:0065007//biological regulation | GO:0005575//cellular_component; GO:0005622//intracellular; GO:0005623//cell; GO:0005737//cytoplasm; GO:0009507//chloroplast; GO:0009536//plastid; GO:0043226//organelle; GO:0043227//membrane-bounded organelle; GO:0043229//intracellular organelle; GO:0043231//intracellular membrane-bounded organelle; GO:0044424//intracellular part; GO:0044444//cytoplasmic part; GO:0044464//cell part | GO:0003674//molecular_function; GO:0003824//catalytic activity; GO:0016491//oxidoreductase activity; GO:0016627//oxidoreductase activity, acting on the CH-CH group of donors; GO:0016636//oxidoreductase activity, acting on the CH-CH group of donors, iron-sulfur protein as acceptor; GO:0050619//phytochromobilin:ferredoxin oxidoreductase activity
KEGG
K08101 | HY2
NR
RWR79863.1 phytochromobilin:ferredoxin oxidoreductase, chloroplastic isoform X1 [Cinnamomum micranthum f. kanehirae]
Swiss-Prot
Q9SR43.1 RecName: Full=Phytochromobilin:ferredoxin oxidoreductase, chloroplastic; AltName: Full=PFB synthase; AltName: Full=PPhiB synthase; AltName: Full=Phytochromobilin synthase; Flags: Precursor [Arabidopsis thaliana]
Biological context

Connected feature records

Follow parent–child relationships among genes, transcripts, coding regions, and protein products.