Feature identity
- Identifier
- PaHa11g17500.1
- Feature type
- mRNA
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 2,787 bp
- Genomic location
- 11:47,970,496–48,008,427
- Strand
- +
Hass · mRNA
PaHa11g17500.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 2,787
- bp
- 11:47,970,496–48,008,427
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: PaHa11g17500
- eggNOG
- Preferred name: LOC104230302 | Seed ortholog: 337451.A0A443PPM1 | COG: COG0457 | eggNOG OG: TPR_19@131567|gd-12, TPR_8@131567|VF-14
- Gene Ontology
- GO:0000127 transcription factor TFIIIC complex; GO:0000995 RNA polymerase III general transcription initiation factor activity; GO:0001650 fibrillar center; GO:0003677 DNA binding; GO:0005515 protein binding; GO:0005634 nucleus; GO:0005654 nucleoplasm; GO:0006383 transcription by RNA polymerase III; GO:0006384 transcription initiation at RNA polymerase III promoter; GO:0008150 biological_process; GO:0008301 DNA binding, bending; GO:0008585 female gonad development; GO:0031965 nuclear membrane; GO:0042791 5S class rRNA transcription by RNA polymerase III; GO:0042797 tRNA transcription by RNA polymerase III
- KEGG
- KO: K15201 | BRITE: 00001, 03021
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePaHa11g17500.1-protein
derives_frommRNAPaHa11g17500.1
mRNAPaHa11g17500.1
part_ofgenePaHa11g17500
CDS
part_ofPaHa11g17500.1-CDS-11-1787993825:47970496..47970788mRNAPaHa11g17500.1
CDS
part_ofPaHa11g17500.1-CDS-11-1787993825:47971984..47972092mRNAPaHa11g17500.1
CDS
part_ofPaHa11g17500.1-CDS-11-1787993825:47973158..47973265mRNAPaHa11g17500.1
CDS
part_ofPaHa11g17500.1-CDS-11-1787993825:47976763..47976944mRNAPaHa11g17500.1
CDS
part_ofPaHa11g17500.1-CDS-11-1787993825:47981432..47981627mRNAPaHa11g17500.1
CDS
part_ofPaHa11g17500.1-CDS-11-1787993825:47983786..47984043mRNAPaHa11g17500.1
CDS
part_ofPaHa11g17500.1-CDS-11-1787993825:47984287..47984433mRNAPaHa11g17500.1
CDS
part_ofPaHa11g17500.1-CDS-11-1787993825:47988811..47988889mRNAPaHa11g17500.1
CDS
part_ofPaHa11g17500.1-CDS-11-1787993825:47993406..47993519mRNAPaHa11g17500.1
CDS
part_ofPaHa11g17500.1-CDS-11-1787993825:47993625..47993794mRNAPaHa11g17500.1
CDS
part_ofPaHa11g17500.1-CDS-11-1787993825:47994929..47995047mRNAPaHa11g17500.1
CDS
part_ofPaHa11g17500.1-CDS-11-1787993825:47997660..47997783mRNAPaHa11g17500.1
CDS
part_ofPaHa11g17500.1-CDS-11-1787993825:47997881..47997955mRNAPaHa11g17500.1
CDS
part_ofPaHa11g17500.1-CDS-11-1787993825:48000212..48000338mRNAPaHa11g17500.1
CDS
part_ofPaHa11g17500.1-CDS-11-1787993825:48004182..48004296mRNAPaHa11g17500.1
CDS
part_ofPaHa11g17500.1-CDS-11-1787993825:48006885..48007075mRNAPaHa11g17500.1
CDS
part_ofPaHa11g17500.1-CDS-11-1787993825:48007154..48007266mRNAPaHa11g17500.1
CDS
part_ofPaHa11g17500.1-CDS-11-1787993825:48008161..48008427mRNAPaHa11g17500.1
exon
part_ofPaHa11g17500.1-exon-11-1787993825:47970496..47970788mRNAPaHa11g17500.1
exon
part_ofPaHa11g17500.1-exon-11-1787993825:47971984..47972092mRNAPaHa11g17500.1
exon
part_ofPaHa11g17500.1-exon-11-1787993825:47973158..47973265mRNAPaHa11g17500.1
exon
part_ofPaHa11g17500.1-exon-11-1787993825:47976763..47976944mRNAPaHa11g17500.1
exon
part_ofPaHa11g17500.1-exon-11-1787993825:47981432..47981627mRNAPaHa11g17500.1
exon
part_ofPaHa11g17500.1-exon-11-1787993825:47983786..47984043mRNAPaHa11g17500.1
exon
part_ofPaHa11g17500.1-exon-11-1787993825:47984287..47984433mRNAPaHa11g17500.1
exon
part_ofPaHa11g17500.1-exon-11-1787993825:47988811..47988889mRNAPaHa11g17500.1
exon
part_ofPaHa11g17500.1-exon-11-1787993825:47993406..47993519mRNAPaHa11g17500.1
exon
part_ofPaHa11g17500.1-exon-11-1787993825:47993625..47993794mRNAPaHa11g17500.1
exon
part_ofPaHa11g17500.1-exon-11-1787993825:47994929..47995047mRNAPaHa11g17500.1
exon
part_ofPaHa11g17500.1-exon-11-1787993825:47997660..47997783mRNAPaHa11g17500.1
exon
part_ofPaHa11g17500.1-exon-11-1787993825:47997881..47997955mRNAPaHa11g17500.1
exon
part_ofPaHa11g17500.1-exon-11-1787993825:48000212..48000338mRNAPaHa11g17500.1
exon
part_ofPaHa11g17500.1-exon-11-1787993825:48004182..48004296mRNAPaHa11g17500.1
exon
part_ofPaHa11g17500.1-exon-11-1787993825:48006885..48007075mRNAPaHa11g17500.1
exon
part_ofPaHa11g17500.1-exon-11-1787993825:48007154..48007266mRNAPaHa11g17500.1
exon
part_ofPaHa11g17500.1-exon-11-1787993825:48008161..48008427mRNAPaHa11g17500.1
