Feature identity
- Identifier
- PaHa11g17400.1
- Feature type
- mRNA
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 2,334 bp
- Genomic location
- 11:47,770,910–47,780,138
- Strand
- −
Hass · mRNA
PaHa11g17400.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 2,334
- bp
- 11:47,770,910–47,780,138
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: PaHa11g17400
- eggNOG
- Preferred name: ARF1 | Seed ortholog: 337451.A0A443PPQ4 | COG: S | eggNOG OG: AUX_IAA@131567|A-1*, AUX_IAA@2759|AW-7, AUX_IAA@3193|qd-19, AUX_IAA@3398|Amh-25, Auxin_resp@131567|A-1*, Auxin_resp@2759|N-4, Auxin_resp@3398|BT-10, B3@131221|yd-19, B3@131567|A-1*, B3@3193|AHu-20, B3@33090|Id-12, B3@3398|BlQ-27
- Gene Ontology
- GO:0003677 DNA binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0005737 cytoplasm; GO:0006355 regulation of DNA-templated transcription; GO:0008219 cell death; GO:0009733 response to auxin; GO:0010150 leaf senescence; GO:0042802 identical protein binding; GO:0043565 sequence-specific DNA binding; GO:0045892 negative regulation of DNA-templated transcription
- KEGG
- KO: K14486 | Pathway: 04075 | BRITE: 00001
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePaHa11g17400.1-protein
derives_frommRNAPaHa11g17400.1
mRNAPaHa11g17400.1
part_ofgenePaHa11g17400
CDS
part_ofPaHa11g17400.1-CDS-11-1787993825:47770910..47771040mRNAPaHa11g17400.1
CDS
part_ofPaHa11g17400.1-CDS-11-1787993825:47771130..47771249mRNAPaHa11g17400.1
CDS
part_ofPaHa11g17400.1-CDS-11-1787993825:47771694..47771759mRNAPaHa11g17400.1
CDS
part_ofPaHa11g17400.1-CDS-11-1787993825:47771848..47771859mRNAPaHa11g17400.1
CDS
part_ofPaHa11g17400.1-CDS-11-1787993825:47771920..47772056mRNAPaHa11g17400.1
CDS
part_ofPaHa11g17400.1-CDS-11-1787993825:47772283..47772473mRNAPaHa11g17400.1
CDS
part_ofPaHa11g17400.1-CDS-11-1787993825:47773693..47774201mRNAPaHa11g17400.1
CDS
part_ofPaHa11g17400.1-CDS-11-1787993825:47774464..47774626mRNAPaHa11g17400.1
CDS
part_ofPaHa11g17400.1-CDS-11-1787993825:47774906..47774981mRNAPaHa11g17400.1
CDS
part_ofPaHa11g17400.1-CDS-11-1787993825:47775148..47775267mRNAPaHa11g17400.1
CDS
part_ofPaHa11g17400.1-CDS-11-1787993825:47775572..47775736mRNAPaHa11g17400.1
CDS
part_ofPaHa11g17400.1-CDS-11-1787993825:47775839..47775929mRNAPaHa11g17400.1
CDS
part_ofPaHa11g17400.1-CDS-11-1787993825:47776368..47776452mRNAPaHa11g17400.1
CDS
part_ofPaHa11g17400.1-CDS-11-1787993825:47776558..47776710mRNAPaHa11g17400.1
CDS
part_ofPaHa11g17400.1-CDS-11-1787993825:47777500..47777556mRNAPaHa11g17400.1
CDS
part_ofPaHa11g17400.1-CDS-11-1787993825:47777690..47777785mRNAPaHa11g17400.1
CDS
part_ofPaHa11g17400.1-CDS-11-1787993825:47778903..47779018mRNAPaHa11g17400.1
CDS
part_ofPaHa11g17400.1-CDS-11-1787993825:47780093..47780138mRNAPaHa11g17400.1
exon
part_ofPaHa11g17400.1-exon-11-1787993825:47770910..47771040mRNAPaHa11g17400.1
exon
part_ofPaHa11g17400.1-exon-11-1787993825:47771130..47771249mRNAPaHa11g17400.1
exon
part_ofPaHa11g17400.1-exon-11-1787993825:47771694..47771759mRNAPaHa11g17400.1
exon
part_ofPaHa11g17400.1-exon-11-1787993825:47771848..47771859mRNAPaHa11g17400.1
exon
part_ofPaHa11g17400.1-exon-11-1787993825:47771920..47772056mRNAPaHa11g17400.1
exon
part_ofPaHa11g17400.1-exon-11-1787993825:47772283..47772473mRNAPaHa11g17400.1
exon
part_ofPaHa11g17400.1-exon-11-1787993825:47773693..47774201mRNAPaHa11g17400.1
exon
part_ofPaHa11g17400.1-exon-11-1787993825:47774464..47774626mRNAPaHa11g17400.1
exon
part_ofPaHa11g17400.1-exon-11-1787993825:47774906..47774981mRNAPaHa11g17400.1
exon
part_ofPaHa11g17400.1-exon-11-1787993825:47775148..47775267mRNAPaHa11g17400.1
exon
part_ofPaHa11g17400.1-exon-11-1787993825:47775572..47775736mRNAPaHa11g17400.1
exon
part_ofPaHa11g17400.1-exon-11-1787993825:47775839..47775929mRNAPaHa11g17400.1
exon
part_ofPaHa11g17400.1-exon-11-1787993825:47776368..47776452mRNAPaHa11g17400.1
exon
part_ofPaHa11g17400.1-exon-11-1787993825:47776558..47776710mRNAPaHa11g17400.1
exon
part_ofPaHa11g17400.1-exon-11-1787993825:47777500..47777556mRNAPaHa11g17400.1
exon
part_ofPaHa11g17400.1-exon-11-1787993825:47777690..47777785mRNAPaHa11g17400.1
exon
part_ofPaHa11g17400.1-exon-11-1787993825:47778903..47779018mRNAPaHa11g17400.1
exon
part_ofPaHa11g17400.1-exon-11-1787993825:47780093..47780138mRNAPaHa11g17400.1
