Feature identity
- Identifier
- PaHa11g16570.1
- Feature type
- mRNA
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 564 bp
- Genomic location
- 11:46,679,067–46,680,916
- Strand
- +
Hass · mRNA
PaHa11g16570.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 564
- bp
- 11:46,679,067–46,680,916
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: PaHa11g16570
- eggNOG
- Preferred name: LOC104591676 | Seed ortholog: 337451.A0A3S3QYJ0 | COG: S | eggNOG OG: HMG_box@131567|Aj-7, HMG_box@2759|Ii-12!, HMG_box@33090|AHq-20
- Gene Ontology
- GO:0000741 karyogamy; GO:0003677 DNA binding; GO:0003700 DNA-binding transcription factor activity; GO:0005634 nucleus; GO:0010197 polar nucleus fusion
- KEGG
- EC: ec:2.1.1.354 | KO: K25507 | Pathway: 00310, 01100, 03410, 04140, 04217, 04613 | BRITE: 00001, 03036
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePaHa11g16570.1-protein
derives_frommRNAPaHa11g16570.1
mRNAPaHa11g16570.1
part_ofgenePaHa11g16570
CDS
part_ofPaHa11g16570.1-CDS-11-1787993825:46679067..46679170mRNAPaHa11g16570.1
CDS
part_ofPaHa11g16570.1-CDS-11-1787993825:46679723..46679805mRNAPaHa11g16570.1
CDS
part_ofPaHa11g16570.1-CDS-11-1787993825:46679925..46679973mRNAPaHa11g16570.1
CDS
part_ofPaHa11g16570.1-CDS-11-1787993825:46680069..46680176mRNAPaHa11g16570.1
CDS
part_ofPaHa11g16570.1-CDS-11-1787993825:46680391..46680448mRNAPaHa11g16570.1
CDS
part_ofPaHa11g16570.1-CDS-11-1787993825:46680561..46680605mRNAPaHa11g16570.1
CDS
part_ofPaHa11g16570.1-CDS-11-1787993825:46680708..46680794mRNAPaHa11g16570.1
CDS
part_ofPaHa11g16570.1-CDS-11-1787993825:46680887..46680916mRNAPaHa11g16570.1
exon
part_ofPaHa11g16570.1-exon-11-1787993825:46679067..46679170mRNAPaHa11g16570.1
exon
part_ofPaHa11g16570.1-exon-11-1787993825:46679723..46679805mRNAPaHa11g16570.1
exon
part_ofPaHa11g16570.1-exon-11-1787993825:46679925..46679973mRNAPaHa11g16570.1
exon
part_ofPaHa11g16570.1-exon-11-1787993825:46680069..46680176mRNAPaHa11g16570.1
exon
part_ofPaHa11g16570.1-exon-11-1787993825:46680391..46680448mRNAPaHa11g16570.1
exon
part_ofPaHa11g16570.1-exon-11-1787993825:46680561..46680605mRNAPaHa11g16570.1
exon
part_ofPaHa11g16570.1-exon-11-1787993825:46680708..46680794mRNAPaHa11g16570.1
exon
part_ofPaHa11g16570.1-exon-11-1787993825:46680887..46680916mRNAPaHa11g16570.1
