Chr01.g06822

Functional evidence

eggNOG

90675.XP_010422461.1,A,[PRP1 splicing factor, N-terminal]

Gene Ontology

PRP1 splicing factor, N-terminal | GO:0000244//spliceosomal tri-snRNP complex assembly; GO:0000375//RNA splicing, via transesterification reactions; GO:0000377//RNA splicing, via transesterification reactions with bulged adenosine as nucleophile; GO:0000387//spliceosomal snRNP assembly; GO:0000398//mRNA splicing, via spliceosome; GO:0006139//nucleobase-containing compound metabolic process; GO:0006259//DNA metabolic process; GO:0006304//DNA modification; GO:0006305//DNA alkylation; GO:0006306//DNA methylation; GO:0006355//regulation of transcription, DNA-templated; GO:0006357//regulation of transcription from RNA polymerase II promoter; GO:0006396//RNA processing; GO:0006397//mRNA processing; GO:0006403//RNA localization; GO:0006725//cellular aromatic compound metabolic process; GO:0006807//nitrogen compound metabolic process; GO:0006950//response to stress; GO:0007275//multicellular organism development; GO:0008150//biological_process; GO:0008152//metabolic process; GO:0008380//RNA splicing; GO:0009266//response to temperature stimulus; GO:0009409//response to cold; GO:0009628//response to abiotic stimulus; GO:0009791//post-embryonic development; GO:0009845//seed germination; GO:0009889//regulation of biosynthetic process; GO:0009891//positive regulation of biosynthetic process; GO:0009892//negative regulation of metabolic process; GO:0009893//positive regulation of metabolic process; GO:0009987//cellular process; GO:0010467//gene expression; GO:0010468//regulation of gene expression; GO:0010556//regulation of macromolecule biosynthetic process; GO:0010557//positive regulation of macromolecule biosynthetic process; GO:0010604//positive regulation of macromolecule metabolic process; GO:0010605//negative regulation of macromolecule metabolic process; GO:0010628//positive regulation of gene expression; GO:0010629//negative regulation of gene expression; GO:0016043//cellular component organization; GO:0016070//RNA metabolic process; GO:0016071//mRNA metabolic process; GO:0016458//gene silencing; GO:0019219//regulation of nucleobase-containing compound metabolic process; GO:0019222//regulation of metabolic process; GO:0022607//cellular component assembly; GO:0022613//ribonucleoprotein complex biogenesis; GO:0022618//ribonucleoprotein complex assembly; GO:0031047//gene silencing by RNA; GO:0031323//regulation of cellular metabolic process; GO:0031325//positive regulation of cellular metabolic process; GO:0031326//regulation of cellular biosynthetic process; GO:0031328//positive regulation of cellular biosynthetic process; GO:0032259//methylation; GO:0032501//multicellular organismal process; GO:0032502//developmental process; GO:0033036//macromolecule localization; GO:0034622//cellular macromolecular complex assembly; GO:0034641//cellular nitrogen compound metabolic process; GO:0043170//macromolecule metabolic process; GO:0043412//macromolecule modification; GO:0043414//macromolecule methylation; GO:0043933//macromolecular complex subunit organization; GO:0044085//cellular component biogenesis; GO:0044237//cellular metabolic process; GO:0044238//primary metabolic process; GO:0044260//cellular macromolecule metabolic process; GO:0044728//DNA methylation or demethylation; GO:0045893//positive regulation of transcription, DNA-templated; GO:0045935//positive regulation of nucleobase-containing compound metabolic process; GO:0045944//positive regulation of transcription from RNA polymerase II promoter; GO:0046483//heterocycle metabolic process; GO:0048518//positive regulation of biological process; GO:0048519//negative regulation of biological process; GO:0048522//positive regulation of cellular process; GO:0048583//regulation of response to stimulus; GO:0048584//positive regulation of response to stimulus; GO:0048856//anatomical structure development; GO:0050789//regulation of biological process; GO:0050794//regulation of cellular process; GO:0050896//response to stimulus; GO:0051171//regulation of nitrogen compound metabolic process; GO:0051173//positive regulation of nitrogen compound metabolic process; GO:0051179//localization; GO:0051252//regulation of RNA metabolic process; GO:0051254//positive regulation of RNA metabolic process; GO:0060147//regulation of posttranscriptional gene silencing; GO:0060148//positive regulation of posttranscriptional gene silencing; GO:0060255//regulation of macromolecule metabolic process; GO:0060964//regulation of gene silencing by miRNA; GO:0060966//regulation of gene silencing by RNA; GO:0060968//regulation of gene silencing; GO:0065003//macromolecular complex assembly; GO:0065007//biological regulation; GO:0070920//regulation of production of small RNA involved in gene silencing by RNA; GO:0071704//organic substance metabolic process; GO:0071826//ribonucleoprotein complex subunit organization; GO:0071840//cellular component organization or biogenesis; GO:0080090//regulation of primary metabolic process; GO:0080188//RNA-directed DNA methylation; GO:0090304//nucleic acid metabolic process; GO:0090351//seedling development; GO:1901360//organic cyclic compound metabolic process; GO:1902680//positive regulation of RNA biosynthetic process; GO:1903506//regulation of nucleic acid-templated transcription; GO:1903508//positive regulation of nucleic acid-templated transcription; GO:1903798//regulation of production of miRNAs involved in gene silencing by miRNA; GO:1903800//positive regulation of production of miRNAs involved in gene silencing by miRNA; GO:2000112//regulation of cellular macromolecule biosynthetic process; GO:2000628//regulation of miRNA metabolic process; GO:2000630//positive regulation of miRNA metabolic process; GO:2000634//regulation of primary miRNA processing; GO:2000636//positive regulation of primary miRNA processing; GO:2000637//positive regulation of gene silencing by miRNA; GO:2001141//regulation of RNA biosynthetic process | GO:0005575//cellular_component; GO:0005622//intracellular; GO:0005623//cell; GO:0005634//nucleus; GO:0005654//nucleoplasm; GO:0005681//spliceosomal complex; GO:0005682//U5 snRNP; GO:0005684//U2-type spliceosomal complex; GO:0015030//Cajal body; GO:0016604//nuclear body; GO:0016607//nuclear speck; GO:0030532//small nuclear ribonucleoprotein complex; GO:0031974//membrane-enclosed lumen; GO:0031981//nuclear lumen; GO:0032991//macromolecular complex; GO:0043226//organelle; GO:0043227//membrane-bounded organelle; GO:0043229//intracellular organelle; GO:0043231//intracellular membrane-bounded organelle; GO:0043233//organelle lumen; GO:0044422//organelle part; GO:0044424//intracellular part; GO:0044428//nuclear part; GO:0044446//intracellular organelle part; GO:0044451//nucleoplasm part; GO:0044464//cell part; GO:0046540//U4/U6 x U5 tri-snRNP complex; GO:0070013//intracellular organelle lumen; GO:0071005//U2-type precatalytic spliceosome; GO:0071011//precatalytic spliceosome; GO:0071013//catalytic step 2 spliceosome; GO:0097525//spliceosomal snRNP complex; GO:0097526//spliceosomal tri-snRNP complex; GO:1902494//catalytic complex; GO:1990904//ribonucleoprotein complex | GO:0003674//molecular_function; GO:0003676//nucleic acid binding; GO:0003712//transcription cofactor activity; GO:0003713//transcription coactivator activity; GO:0003723//RNA binding; GO:0005102//receptor binding; GO:0005488//binding; GO:0005515//protein binding; GO:0008134//transcription factor binding; GO:0035257//nuclear hormone receptor binding; GO:0035258//steroid hormone receptor binding; GO:0043021//ribonucleoprotein complex binding; GO:0044877//macromolecular complex binding; GO:0050681//androgen receptor binding; GO:0051427//hormone receptor binding; GO:0097159//organic cyclic compound binding; GO:1901363//heterocyclic compound binding

KEGG

K12855 | PRPF6, PRP6

NR

CAN65423.1 hypothetical protein VITISV_024588 [Vitis vinifera]

Swiss-Prot

Q9ZT71.1 RecName: Full=Protein STABILIZED1; AltName: Full=Pre-mRNA processing factor 6-like protein; AltName: Full=Protein EMBRYO DEFECTIVE 2770 [Arabidopsis thaliana]