Feature identity
- Identifier
- PaHa11g12150.1
- Feature type
- mRNA
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 1,572 bp
- Genomic location
- 11:38,677,640–38,721,134
- Strand
- −
Hass · mRNA
PaHa11g12150.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 1,572
- bp
- 11:38,677,640–38,721,134
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: PaHa11g12150
- eggNOG
- Preferred name: LOC109018894 | Seed ortholog: 106549.A0A540N8X3 | COG: COG2132 | eggNOG OG: Cpn60_TCP1@131567|t-7, Cpn60_TCP1@2759|GZ-15, Cpn60_TCP1@3749|OFu-53, Cu-oxidase@131567|A-1, Cu-oxidase@1437183|Bok-22, Cu-oxidase@2759|v-6, Cu-oxidase@3193|ALV-18, Cu-oxidase@3398|Auh-20, Cu-oxidase@35493|Kt-12, Cu-oxidase_3@131567|C-2!, Cu-oxidase_3@1437183|BNS-23, Cu-oxidase_3@3193|Wt-16, Cu-oxidase_3@3398|wc-19, MaoC_dehydratas@131567|vZ-23
- Gene Ontology
- GO:0005739 mitochondrion; GO:0005777 peroxisome; GO:0006635 fatty acid beta-oxidation; GO:0018812 3-hydroxyacyl-CoA dehydratase activity
- KEGG
- EC: ec:4.2.1.119 | KO: K09494 | Pathway: 00053, 00120, 00410, 00640, 01040, 01100, 01200, 01212, 04146 | Module: M00013, M00104, M00861, M00862 | BRITE: 00001, 03037, 03110, 04147
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePaHa11g12150.1-protein
derives_frommRNAPaHa11g12150.1
mRNAPaHa11g12150.1
part_ofgenePaHa11g12150
CDS
part_ofPaHa11g12150.1-CDS-11-1787993825:38677640..38677727mRNAPaHa11g12150.1
CDS
part_ofPaHa11g12150.1-CDS-11-1787993825:38677906..38678079mRNAPaHa11g12150.1
CDS
part_ofPaHa11g12150.1-CDS-11-1787993825:38680374..38680444mRNAPaHa11g12150.1
CDS
part_ofPaHa11g12150.1-CDS-11-1787993825:38698706..38698856mRNAPaHa11g12150.1
CDS
part_ofPaHa11g12150.1-CDS-11-1787993825:38698931..38699003mRNAPaHa11g12150.1
CDS
part_ofPaHa11g12150.1-CDS-11-1787993825:38702750..38702789mRNAPaHa11g12150.1
CDS
part_ofPaHa11g12150.1-CDS-11-1787993825:38703882..38703954mRNAPaHa11g12150.1
CDS
part_ofPaHa11g12150.1-CDS-11-1787993825:38710544..38710614mRNAPaHa11g12150.1
CDS
part_ofPaHa11g12150.1-CDS-11-1787993825:38711024..38711129mRNAPaHa11g12150.1
CDS
part_ofPaHa11g12150.1-CDS-11-1787993825:38712112..38712134mRNAPaHa11g12150.1
CDS
part_ofPaHa11g12150.1-CDS-11-1787993825:38713941..38713995mRNAPaHa11g12150.1
CDS
part_ofPaHa11g12150.1-CDS-11-1787993825:38718411..38718553mRNAPaHa11g12150.1
CDS
part_ofPaHa11g12150.1-CDS-11-1787993825:38718657..38718972mRNAPaHa11g12150.1
CDS
part_ofPaHa11g12150.1-CDS-11-1787993825:38720779..38720873mRNAPaHa11g12150.1
CDS
part_ofPaHa11g12150.1-CDS-11-1787993825:38720960..38720998mRNAPaHa11g12150.1
CDS
part_ofPaHa11g12150.1-CDS-11-1787993825:38721081..38721134mRNAPaHa11g12150.1
exon
part_ofPaHa11g12150.1-exon-11-1787993825:38677640..38677727mRNAPaHa11g12150.1
exon
part_ofPaHa11g12150.1-exon-11-1787993825:38677906..38678079mRNAPaHa11g12150.1
exon
part_ofPaHa11g12150.1-exon-11-1787993825:38680374..38680444mRNAPaHa11g12150.1
exon
part_ofPaHa11g12150.1-exon-11-1787993825:38698706..38698856mRNAPaHa11g12150.1
exon
part_ofPaHa11g12150.1-exon-11-1787993825:38698931..38699003mRNAPaHa11g12150.1
exon
part_ofPaHa11g12150.1-exon-11-1787993825:38702750..38702789mRNAPaHa11g12150.1
exon
part_ofPaHa11g12150.1-exon-11-1787993825:38703882..38703954mRNAPaHa11g12150.1
exon
part_ofPaHa11g12150.1-exon-11-1787993825:38710544..38710614mRNAPaHa11g12150.1
exon
part_ofPaHa11g12150.1-exon-11-1787993825:38711024..38711129mRNAPaHa11g12150.1
exon
part_ofPaHa11g12150.1-exon-11-1787993825:38712112..38712134mRNAPaHa11g12150.1
exon
part_ofPaHa11g12150.1-exon-11-1787993825:38713941..38713995mRNAPaHa11g12150.1
exon
part_ofPaHa11g12150.1-exon-11-1787993825:38718411..38718553mRNAPaHa11g12150.1
exon
part_ofPaHa11g12150.1-exon-11-1787993825:38718657..38718972mRNAPaHa11g12150.1
exon
part_ofPaHa11g12150.1-exon-11-1787993825:38720779..38720873mRNAPaHa11g12150.1
exon
part_ofPaHa11g12150.1-exon-11-1787993825:38720960..38720998mRNAPaHa11g12150.1
exon
part_ofPaHa11g12150.1-exon-11-1787993825:38721081..38721134mRNAPaHa11g12150.1
