Feature identity
- Identifier
- PaHa11g10260.1
- Feature type
- mRNA
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 660 bp
- Genomic location
- 11:34,581,667–34,597,138
- Strand
- −
Hass · mRNA
PaHa11g10260.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 660
- bp
- 11:34,581,667–34,597,138
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: PaHa11g10260
- eggNOG
- Preferred name: LOC107791153 | Seed ortholog: 337451.A0A443PNE3 | COG: S | eggNOG OG: FKBP_C@131567|JD-12, FKBP_C@33090|BSB-25
- Gene Ontology
- GO:0003755 peptidyl-prolyl cis-trans isomerase activity; GO:0005515 protein binding; GO:0005829 cytosol; GO:0008150 biological_process; GO:0009507 chloroplast; GO:0009534 chloroplast thylakoid; GO:0009535 chloroplast thylakoid membrane; GO:0009543 chloroplast thylakoid lumen; GO:0009579 thylakoid; GO:0016491 oxidoreductase activity
- KEGG
- EC: ec:5.2.1.8 | KO: K01802 | BRITE: 00001, 01000
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePaHa11g10260.1-protein
derives_frommRNAPaHa11g10260.1
mRNAPaHa11g10260.1
part_ofgenePaHa11g10260
CDS
part_ofPaHa11g10260.1-CDS-11-1787993825:34581667..34581694mRNAPaHa11g10260.1
CDS
part_ofPaHa11g10260.1-CDS-11-1787993825:34581830..34581870mRNAPaHa11g10260.1
CDS
part_ofPaHa11g10260.1-CDS-11-1787993825:34587873..34587950mRNAPaHa11g10260.1
CDS
part_ofPaHa11g10260.1-CDS-11-1787993825:34591155..34591244mRNAPaHa11g10260.1
CDS
part_ofPaHa11g10260.1-CDS-11-1787993825:34592123..34592197mRNAPaHa11g10260.1
CDS
part_ofPaHa11g10260.1-CDS-11-1787993825:34594544..34594601mRNAPaHa11g10260.1
CDS
part_ofPaHa11g10260.1-CDS-11-1787993825:34596587..34596642mRNAPaHa11g10260.1
CDS
part_ofPaHa11g10260.1-CDS-11-1787993825:34596719..34596774mRNAPaHa11g10260.1
CDS
part_ofPaHa11g10260.1-CDS-11-1787993825:34596872..34596997mRNAPaHa11g10260.1
CDS
part_ofPaHa11g10260.1-CDS-11-1787993825:34597087..34597138mRNAPaHa11g10260.1
exon
part_ofPaHa11g10260.1-exon-11-1787993825:34581667..34581694mRNAPaHa11g10260.1
exon
part_ofPaHa11g10260.1-exon-11-1787993825:34581830..34581870mRNAPaHa11g10260.1
exon
part_ofPaHa11g10260.1-exon-11-1787993825:34587873..34587950mRNAPaHa11g10260.1
exon
part_ofPaHa11g10260.1-exon-11-1787993825:34591155..34591244mRNAPaHa11g10260.1
exon
part_ofPaHa11g10260.1-exon-11-1787993825:34592123..34592197mRNAPaHa11g10260.1
exon
part_ofPaHa11g10260.1-exon-11-1787993825:34594544..34594601mRNAPaHa11g10260.1
exon
part_ofPaHa11g10260.1-exon-11-1787993825:34596587..34596642mRNAPaHa11g10260.1
exon
part_ofPaHa11g10260.1-exon-11-1787993825:34596719..34596774mRNAPaHa11g10260.1
exon
part_ofPaHa11g10260.1-exon-11-1787993825:34596872..34596997mRNAPaHa11g10260.1
exon
part_ofPaHa11g10260.1-exon-11-1787993825:34597087..34597138mRNAPaHa11g10260.1
