Feature identity
- Identifier
- PaHa11g09930.1
- Feature type
- mRNA
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 402 bp
- Genomic location
- 11:33,847,205–33,847,606
- Strand
- −
Hass · mRNA
PaHa11g09930.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 402
- bp
- 11:33,847,205–33,847,606
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: PaHa11g09930
- eggNOG
- Preferred name: LOC104599494 | Seed ortholog: 337451.A0A443PFU2 | COG: S | eggNOG OG: Auxin_resp@131567|A-1*, Auxin_resp@2759|B-2, Auxin_resp@3398|Cm-12, B3@131221|yd-19, B3@131567|A-1*, B3@3193|AHu-20, B3@33090|Id-12, B3@3398|BCh-24
- Gene Ontology
- GO:0000976 transcription cis-regulatory region binding; GO:0003677 DNA binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0006355 regulation of DNA-templated transcription; GO:0009733 response to auxin; GO:0009850 auxin metabolic process; GO:0010050 vegetative phase change; GO:0010158 abaxial cell fate specification; GO:0010582 floral meristem determinacy; GO:0031490 chromatin DNA binding; GO:0036094 small molecule binding; GO:0140677 molecular function activator activity; GO:1902584 positive regulation of response to water deprivation
- KEGG
- KO: K14486 | Pathway: 04075 | BRITE: 00001
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePaHa11g09930.1-protein
derives_frommRNAPaHa11g09930.1
mRNAPaHa11g09930.1
part_ofgenePaHa11g09930
CDS
part_ofPaHa11g09930.1-CDS-11-1787993825:33847205..33847606mRNAPaHa11g09930.1
exon
part_ofPaHa11g09930.1-exon-11-1787993825:33847205..33847606mRNAPaHa11g09930.1
