Feature identity
- Identifier
- PaHa11g07500.1
- Feature type
- mRNA
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 1,173 bp
- Genomic location
- 11:22,298,208–22,303,734
- Strand
- −
Hass · mRNA
PaHa11g07500.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 1,173
- bp
- 11:22,298,208–22,303,734
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: PaHa11g07500
- eggNOG
- Preferred name: LOC109013146 | Seed ortholog: 3476.A0A2P5CW95 | COG: S | eggNOG OG: zf-C2H2@131567|Asb-21, zf-C2H2@2759|DEq-25, zf-C2H2@3481|tFi-45
- Gene Ontology
- GO:0003700 DNA-binding transcription factor activity; GO:0003723 RNA binding; GO:0005634 nucleus; GO:0005730 nucleolus; GO:0005829 cytosol; GO:0008097 5S rRNA binding; GO:0080084 5S rDNA binding
- KEGG
- KO: K09191 | BRITE: 00001, 03000, 03021
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePaHa11g07500.1-protein
derives_frommRNAPaHa11g07500.1
mRNAPaHa11g07500.1
part_ofgenePaHa11g07500
CDS
part_ofPaHa11g07500.1-CDS-11-1787993825:22298208..22298218mRNAPaHa11g07500.1
CDS
part_ofPaHa11g07500.1-CDS-11-1787993825:22298339..22298413mRNAPaHa11g07500.1
CDS
part_ofPaHa11g07500.1-CDS-11-1787993825:22299955..22300063mRNAPaHa11g07500.1
CDS
part_ofPaHa11g07500.1-CDS-11-1787993825:22300752..22300895mRNAPaHa11g07500.1
CDS
part_ofPaHa11g07500.1-CDS-11-1787993825:22301034..22301269mRNAPaHa11g07500.1
CDS
part_ofPaHa11g07500.1-CDS-11-1787993825:22301843..22302119mRNAPaHa11g07500.1
CDS
part_ofPaHa11g07500.1-CDS-11-1787993825:22303287..22303415mRNAPaHa11g07500.1
CDS
part_ofPaHa11g07500.1-CDS-11-1787993825:22303543..22303734mRNAPaHa11g07500.1
exon
part_ofPaHa11g07500.1-exon-11-1787993825:22298208..22298218mRNAPaHa11g07500.1
exon
part_ofPaHa11g07500.1-exon-11-1787993825:22298339..22298413mRNAPaHa11g07500.1
exon
part_ofPaHa11g07500.1-exon-11-1787993825:22299955..22300063mRNAPaHa11g07500.1
exon
part_ofPaHa11g07500.1-exon-11-1787993825:22300752..22300895mRNAPaHa11g07500.1
exon
part_ofPaHa11g07500.1-exon-11-1787993825:22301034..22301269mRNAPaHa11g07500.1
exon
part_ofPaHa11g07500.1-exon-11-1787993825:22301843..22302119mRNAPaHa11g07500.1
exon
part_ofPaHa11g07500.1-exon-11-1787993825:22303287..22303415mRNAPaHa11g07500.1
exon
part_ofPaHa11g07500.1-exon-11-1787993825:22303543..22303734mRNAPaHa11g07500.1
