Feature identity
- Identifier
- PaHa11g06850.1
- Feature type
- mRNA
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 1,101 bp
- Genomic location
- 11:16,592,146–16,613,204
- Strand
- −
Hass · mRNA
PaHa11g06850.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 1,101
- bp
- 11:16,592,146–16,613,204
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: PaHa11g06850
- eggNOG
- Preferred name: ACBP2 | Seed ortholog: 56857.A0A200QWA7 | COG: S | eggNOG OG: ACBP@131567|F-3, ACBP@2759|Bn-8, Ank_2@131567|Mm-10, Ank_2@2759|BXV-16
- Gene Ontology
- GO:0000062 fatty-acyl-CoA binding; GO:0001666 response to hypoxia; GO:0005515 protein binding; GO:0005737 cytoplasm; GO:0005783 endoplasmic reticulum; GO:0005789 endoplasmic reticulum membrane; GO:0005886 plasma membrane; GO:0006629 lipid metabolic process; GO:0006869 lipid transport; GO:0008289 lipid binding; GO:0009409 response to cold; GO:0009505 plant-type cell wall; GO:0009507 chloroplast; GO:0009514 glyoxysome; GO:0009536 plastid; GO:0009737 response to abscisic acid; GO:0010029 regulation of seed germination; GO:0010162 seed dormancy process; GO:0010288 response to lead ion; GO:0032791 lead ion binding; GO:0048316 seed development; GO:0055089 fatty acid homeostasis; GO:0055092 sterol homeostasis; GO:0070300 phosphatidic acid binding; GO:1900140 regulation of seedling development
- KEGG
- KO: K27751 | Pathway: 04624 | BRITE: 00001
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePaHa11g06850.1-protein
derives_frommRNAPaHa11g06850.1
mRNAPaHa11g06850.1
part_ofgenePaHa11g06850
CDS
part_ofPaHa11g06850.1-CDS-11-1787993825:16592146..16592313mRNAPaHa11g06850.1
CDS
part_ofPaHa11g06850.1-CDS-11-1787993825:16592578..16592675mRNAPaHa11g06850.1
CDS
part_ofPaHa11g06850.1-CDS-11-1787993825:16599194..16599285mRNAPaHa11g06850.1
CDS
part_ofPaHa11g06850.1-CDS-11-1787993825:16600565..16600665mRNAPaHa11g06850.1
CDS
part_ofPaHa11g06850.1-CDS-11-1787993825:16600784..16600889mRNAPaHa11g06850.1
CDS
part_ofPaHa11g06850.1-CDS-11-1787993825:16612669..16613204mRNAPaHa11g06850.1
exon
part_ofPaHa11g06850.1-exon-11-1787993825:16592146..16592313mRNAPaHa11g06850.1
exon
part_ofPaHa11g06850.1-exon-11-1787993825:16592578..16592675mRNAPaHa11g06850.1
exon
part_ofPaHa11g06850.1-exon-11-1787993825:16599194..16599285mRNAPaHa11g06850.1
exon
part_ofPaHa11g06850.1-exon-11-1787993825:16600565..16600665mRNAPaHa11g06850.1
exon
part_ofPaHa11g06850.1-exon-11-1787993825:16600784..16600889mRNAPaHa11g06850.1
exon
part_ofPaHa11g06850.1-exon-11-1787993825:16612669..16613204mRNAPaHa11g06850.1
