Feature identity
- Identifier
- PaHa11g05040.1
- Feature type
- mRNA
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 1,659 bp
- Genomic location
- 11:11,415,073–11,425,030
- Strand
- +
Hass · mRNA
PaHa11g05040.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 1,659
- bp
- 11:11,415,073–11,425,030
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: PaHa11g05040
- eggNOG
- Preferred name: SKU5 | Seed ortholog: 337451.A0A443PMG2 | COG: COG2132 | eggNOG OG: Cu-oxidase@131567|A-1, Cu-oxidase@2759|v-6, Cu-oxidase@3193|mX-16, Cu-oxidase@3398|BoU-22, Cu-oxidase@35493|Kt-12, Cu-oxidase_2@2759|B-2!, Cu-oxidase_2@3193|Bs-9, Cu-oxidase_2@3398|Cy-10, Cu-oxidase_3@131567|C-2!, Cu-oxidase_3@3193|Wu-16, Cu-oxidase_3@3398|Bnb-24, Cu-oxidase_3@58023|ll-18
- Gene Ontology
- GO:0004097 catechol oxidase activity; GO:0004322 ferroxidase activity; GO:0004503 tyrosinase activity; GO:0005576 extracellular region; GO:0008447 L-ascorbate oxidase activity; GO:0009897 external side of plasma membrane; GO:0009986 cell surface; GO:0016682 oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor; GO:0040003 chitin-based cuticle development; GO:0045178 basal part of cell; GO:0055070 copper ion homeostasis; GO:0098711 iron ion import across plasma membrane
- KEGG
- EC: ec:1.10.3.2, ec:1.10.3.3 | KO: K19791 | Pathway: 00053, 01100 | BRITE: 00001, 02000
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePaHa11g05040.1-protein
derives_frommRNAPaHa11g05040.1
mRNAPaHa11g05040.1
part_ofgenePaHa11g05040
CDS
part_ofPaHa11g05040.1-CDS-11-1787993825:11415073..11415192mRNAPaHa11g05040.1
CDS
part_ofPaHa11g05040.1-CDS-11-1787993825:11416076..11416185mRNAPaHa11g05040.1
CDS
part_ofPaHa11g05040.1-CDS-11-1787993825:11417323..11417593mRNAPaHa11g05040.1
CDS
part_ofPaHa11g05040.1-CDS-11-1787993825:11418071..11418188mRNAPaHa11g05040.1
CDS
part_ofPaHa11g05040.1-CDS-11-1787993825:11420105..11420465mRNAPaHa11g05040.1
CDS
part_ofPaHa11g05040.1-CDS-11-1787993825:11421031..11421399mRNAPaHa11g05040.1
CDS
part_ofPaHa11g05040.1-CDS-11-1787993825:11421859..11421931mRNAPaHa11g05040.1
CDS
part_ofPaHa11g05040.1-CDS-11-1787993825:11424081..11424258mRNAPaHa11g05040.1
CDS
part_ofPaHa11g05040.1-CDS-11-1787993825:11424972..11425030mRNAPaHa11g05040.1
exon
part_ofPaHa11g05040.1-exon-11-1787993825:11415073..11415192mRNAPaHa11g05040.1
exon
part_ofPaHa11g05040.1-exon-11-1787993825:11416076..11416185mRNAPaHa11g05040.1
exon
part_ofPaHa11g05040.1-exon-11-1787993825:11417323..11417593mRNAPaHa11g05040.1
exon
part_ofPaHa11g05040.1-exon-11-1787993825:11418071..11418188mRNAPaHa11g05040.1
exon
part_ofPaHa11g05040.1-exon-11-1787993825:11420105..11420465mRNAPaHa11g05040.1
exon
part_ofPaHa11g05040.1-exon-11-1787993825:11421031..11421399mRNAPaHa11g05040.1
exon
part_ofPaHa11g05040.1-exon-11-1787993825:11421859..11421931mRNAPaHa11g05040.1
exon
part_ofPaHa11g05040.1-exon-11-1787993825:11424081..11424258mRNAPaHa11g05040.1
exon
part_ofPaHa11g05040.1-exon-11-1787993825:11424972..11425030mRNAPaHa11g05040.1
