Anise · gene

Chr06.g45920

A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.

30,703
bp
Chr06:26,970,972–27,001,674
genomic location
Record overview

Feature identity

Identifier
Chr06.g45920
Feature type
gene
Genome collection
Anise
Organism
Persea americana-Anise
Sequence length
30,703 bp
Genomic location
Chr06:26,970,972–27,001,674
Strand
−
Open original Tripal record
Computational annotation

Functional evidence

These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.

eggNOG
42345.XP_008811817.1,K,[transcription factor]
Gene Ontology
transcription factor | GO:0006355//regulation of transcription, DNA-templated; GO:0007275//multicellular organism development; GO:0007389//pattern specification process; GO:0008150//biological_process; GO:0009889//regulation of biosynthetic process; GO:0009891//positive regulation of biosynthetic process; GO:0009893//positive regulation of metabolic process; GO:0009966//regulation of signal transduction; GO:0009968//negative regulation of signal transduction; GO:0010468//regulation of gene expression; GO:0010556//regulation of macromolecule biosynthetic process; GO:0010557//positive regulation of macromolecule biosynthetic process; GO:0010604//positive regulation of macromolecule metabolic process; GO:0010628//positive regulation of gene expression; GO:0010646//regulation of cell communication; GO:0010648//negative regulation of cell communication; GO:0019219//regulation of nucleobase-containing compound metabolic process; GO:0019222//regulation of metabolic process; GO:0023051//regulation of signaling; GO:0023057//negative regulation of signaling; GO:0031323//regulation of cellular metabolic process; GO:0031325//positive regulation of cellular metabolic process; GO:0031326//regulation of cellular biosynthetic process; GO:0031328//positive regulation of cellular biosynthetic process; GO:0032501//multicellular organismal process; GO:0032502//developmental process; GO:0045893//positive regulation of transcription, DNA-templated; GO:0045935//positive regulation of nucleobase-containing compound metabolic process; GO:0048367//shoot system development; GO:0048518//positive regulation of biological process; GO:0048519//negative regulation of biological process; GO:0048522//positive regulation of cellular process; GO:0048523//negative regulation of cellular process; GO:0048583//regulation of response to stimulus; GO:0048585//negative regulation of response to stimulus; GO:0048731//system development; GO:0048856//anatomical structure development; GO:0050789//regulation of biological process; GO:0050794//regulation of cellular process; GO:0051171//regulation of nitrogen compound metabolic process; GO:0051173//positive regulation of nitrogen compound metabolic process; GO:0051252//regulation of RNA metabolic process; GO:0051254//positive regulation of RNA metabolic process; GO:0060255//regulation of macromolecule metabolic process; GO:0065007//biological regulation; GO:0080006//internode patterning; GO:0080090//regulation of primary metabolic process; GO:0090227//regulation of red or far-red light signaling pathway; GO:0090229//negative regulation of red or far-red light signaling pathway; GO:1902680//positive regulation of RNA biosynthetic process; GO:1903506//regulation of nucleic acid-templated transcription; GO:1903508//positive regulation of nucleic acid-templated transcription; GO:2000030//regulation of response to red or far red light; GO:2000112//regulation of cellular macromolecule biosynthetic process; GO:2001141//regulation of RNA biosynthetic process | GO:0005575//cellular_component; GO:0005622//intracellular; GO:0005623//cell; GO:0005634//nucleus; GO:0043226//organelle; GO:0043227//membrane-bounded organelle; GO:0043229//intracellular organelle; GO:0043231//intracellular membrane-bounded organelle; GO:0044424//intracellular part; GO:0044464//cell part | -
KEGG
K16189 | PIF4
NR
RWR88702.1 transcription factor PIF4-like protein isoform X2 [Cinnamomum micranthum f. kanehirae]
Swiss-Prot
Q10CH5.1 RecName: Full=Transcription factor PHYTOCHROME INTERACTING FACTOR-LIKE 13; Short=OsPIL13; Short=PIF-like protein 13; AltName: Full=Basic helix-loop-helix protein 152; Short=OsbHLH152; AltName: Full=OsPIL1 [Oryza sativa Japonica Group]
Biological context

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