Feature identity
- Identifier
- PaHa11g03590.1
- Feature type
- mRNA
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 879 bp
- Genomic location
- 11:7,965,462–7,968,361
- Strand
- +
Hass · mRNA
PaHa11g03590.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 879
- bp
- 11:7,965,462–7,968,361
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: PaHa11g03590
- eggNOG
- Preferred name: LAF1 | Seed ortholog: 337451.A0A3S3QYY0 | COG: S | eggNOG OG: Myb_DNA-binding@131221|JKd-42, Myb_DNA-binding@131567|AOS-27, Myb_DNA-binding@33090|FSl-38, Myb_DNA-binding@35493|IIv-41
- Gene Ontology
- GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0009639 response to red or far red light; GO:0010018 far-red light signaling pathway; GO:0016607 nuclear speck; GO:0045893 positive regulation of DNA-templated transcription
- KEGG
- KO: K09422 | BRITE: 00001, 03000
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePaHa11g03590.1-protein
derives_frommRNAPaHa11g03590.1
mRNAPaHa11g03590.1
part_ofgenePaHa11g03590
CDS
part_ofPaHa11g03590.1-CDS-11-1787993825:7965462..7965597mRNAPaHa11g03590.1
CDS
part_ofPaHa11g03590.1-CDS-11-1787993825:7966542..7966671mRNAPaHa11g03590.1
CDS
part_ofPaHa11g03590.1-CDS-11-1787993825:7967749..7968361mRNAPaHa11g03590.1
exon
part_ofPaHa11g03590.1-exon-11-1787993825:7965462..7965597mRNAPaHa11g03590.1
exon
part_ofPaHa11g03590.1-exon-11-1787993825:7966542..7966671mRNAPaHa11g03590.1
exon
part_ofPaHa11g03590.1-exon-11-1787993825:7967749..7968361mRNAPaHa11g03590.1
