Feature identity
- Identifier
- PaHa01g31110.1
- Feature type
- mRNA
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 984 bp
- Genomic location
- 1:80,091,023–80,092,875
- Strand
- +
Hass · mRNA
PaHa01g31110.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 984
- bp
- 1:80,091,023–80,092,875
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: PaHa01g31110
- eggNOG
- Preferred name: VESTR_0 | Seed ortholog: 337451.A0A443NQD9 | COG: COG0451 | eggNOG OG: Epimerase@131567|KJ-12, Epimerase@3398|Hwt-26
- Gene Ontology
- GO:0004022 alcohol dehydrogenase (NAD+) activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0005737 cytoplasm; GO:0009646 response to absence of light; GO:0010422 regulation of brassinosteroid biosynthetic process; GO:0016131 brassinosteroid metabolic process; GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor; GO:0016621 cinnamoyl-CoA reductase (NADP+) activity; GO:0102386 phenylacetaldehyde reductase activity
- KEGG
- EC: ec:1.1.1.348, ec:1.1.1.415 | KO: K13265, K22098 | Pathway: 00943, 01100, 01110 | Module: M00942, M00946 | BRITE: 00001, 01000
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePaHa01g31110.1-protein
derives_frommRNAPaHa01g31110.1
mRNAPaHa01g31110.1
part_ofgenePaHa01g31110
CDS
part_ofPaHa01g31110.1-CDS-1-1787993825:80091023..80091143mRNAPaHa01g31110.1
CDS
part_ofPaHa01g31110.1-CDS-1-1787993825:80091250..80091777mRNAPaHa01g31110.1
CDS
part_ofPaHa01g31110.1-CDS-1-1787993825:80092438..80092630mRNAPaHa01g31110.1
CDS
part_ofPaHa01g31110.1-CDS-1-1787993825:80092734..80092875mRNAPaHa01g31110.1
exon
part_ofPaHa01g31110.1-exon-1-1787993825:80091023..80091143mRNAPaHa01g31110.1
exon
part_ofPaHa01g31110.1-exon-1-1787993825:80091250..80091777mRNAPaHa01g31110.1
exon
part_ofPaHa01g31110.1-exon-1-1787993825:80092438..80092630mRNAPaHa01g31110.1
exon
part_ofPaHa01g31110.1-exon-1-1787993825:80092734..80092875mRNAPaHa01g31110.1
