Feature identity
- Identifier
- PaHa11g01280.1
- Feature type
- mRNA
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 2,067 bp
- Genomic location
- 11:3,125,138–3,135,566
- Strand
- +
Hass · mRNA
PaHa11g01280.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 2,067
- bp
- 11:3,125,138–3,135,566
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: PaHa11g01280
- eggNOG
- Preferred name: LOC106755097 | Seed ortholog: 337451.A0A3S3P2B0 | COG: S | eggNOG OG: bHLH-MYC_N@131567|A-1*, bHLH-MYC_N@2759|B-2, bHLH-MYC_N@3193|m-7, bHLH-MYC_N@3398|AV-9
- Gene Ontology
- GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0006355 regulation of DNA-templated transcription; GO:0010087 phloem or xylem histogenesis; GO:0046983 protein dimerization activity; GO:0048364 root development
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePaHa11g01280.1-protein
derives_frommRNAPaHa11g01280.1
mRNAPaHa11g01280.1
part_ofgenePaHa11g01280
CDS
part_ofPaHa11g01280.1-CDS-11-1787993825:3125138..3125247mRNAPaHa11g01280.1
CDS
part_ofPaHa11g01280.1-CDS-11-1787993825:3125523..3125705mRNAPaHa11g01280.1
CDS
part_ofPaHa11g01280.1-CDS-11-1787993825:3126821..3126905mRNAPaHa11g01280.1
CDS
part_ofPaHa11g01280.1-CDS-11-1787993825:3126995..3127036mRNAPaHa11g01280.1
CDS
part_ofPaHa11g01280.1-CDS-11-1787993825:3127855..3127914mRNAPaHa11g01280.1
CDS
part_ofPaHa11g01280.1-CDS-11-1787993825:3131943..3132074mRNAPaHa11g01280.1
CDS
part_ofPaHa11g01280.1-CDS-11-1787993825:3132149..3132776mRNAPaHa11g01280.1
CDS
part_ofPaHa11g01280.1-CDS-11-1787993825:3132894..3133270mRNAPaHa11g01280.1
CDS
part_ofPaHa11g01280.1-CDS-11-1787993825:3133395..3133496mRNAPaHa11g01280.1
CDS
part_ofPaHa11g01280.1-CDS-11-1787993825:3134129..3134269mRNAPaHa11g01280.1
CDS
part_ofPaHa11g01280.1-CDS-11-1787993825:3134383..3134508mRNAPaHa11g01280.1
CDS
part_ofPaHa11g01280.1-CDS-11-1787993825:3135486..3135566mRNAPaHa11g01280.1
exon
part_ofPaHa11g01280.1-exon-11-1787993825:3125138..3125247mRNAPaHa11g01280.1
exon
part_ofPaHa11g01280.1-exon-11-1787993825:3125523..3125705mRNAPaHa11g01280.1
exon
part_ofPaHa11g01280.1-exon-11-1787993825:3126821..3126905mRNAPaHa11g01280.1
exon
part_ofPaHa11g01280.1-exon-11-1787993825:3126995..3127036mRNAPaHa11g01280.1
exon
part_ofPaHa11g01280.1-exon-11-1787993825:3127855..3127914mRNAPaHa11g01280.1
exon
part_ofPaHa11g01280.1-exon-11-1787993825:3131943..3132074mRNAPaHa11g01280.1
exon
part_ofPaHa11g01280.1-exon-11-1787993825:3132149..3132776mRNAPaHa11g01280.1
exon
part_ofPaHa11g01280.1-exon-11-1787993825:3132894..3133270mRNAPaHa11g01280.1
exon
part_ofPaHa11g01280.1-exon-11-1787993825:3133395..3133496mRNAPaHa11g01280.1
exon
part_ofPaHa11g01280.1-exon-11-1787993825:3134129..3134269mRNAPaHa11g01280.1
exon
part_ofPaHa11g01280.1-exon-11-1787993825:3134383..3134508mRNAPaHa11g01280.1
exon
part_ofPaHa11g01280.1-exon-11-1787993825:3135486..3135566mRNAPaHa11g01280.1
