Feature identity
- Identifier
- PaHa11g01240.1
- Feature type
- mRNA
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 639 bp
- Genomic location
- 11:3,074,780–3,083,403
- Strand
- +
Hass · mRNA
PaHa11g01240.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 639
- bp
- 11:3,074,780–3,083,403
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: PaHa11g01240
- eggNOG
- Preferred name: LOC104600852 | Seed ortholog: 337451.A0A3S3QWF0 | COG: S | eggNOG OG: HLH@131567|BWE-22, HLH@3398|KNo-34
- Gene Ontology
- GO:0000976 transcription cis-regulatory region binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0006355 regulation of DNA-templated transcription; GO:0010030 positive regulation of seed germination; GO:0043565 sequence-specific DNA binding; GO:0071333 cellular response to glucose stimulus
- KEGG
- KO: K09114, K09115 | BRITE: 00001, 03000
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePaHa11g01240.1-protein
derives_frommRNAPaHa11g01240.1
mRNAPaHa11g01240.1
part_ofgenePaHa11g01240
CDS
part_ofPaHa11g01240.1-CDS-11-1787993825:3074780..3074859mRNAPaHa11g01240.1
CDS
part_ofPaHa11g01240.1-CDS-11-1787993825:3076459..3076527mRNAPaHa11g01240.1
CDS
part_ofPaHa11g01240.1-CDS-11-1787993825:3081258..3081335mRNAPaHa11g01240.1
CDS
part_ofPaHa11g01240.1-CDS-11-1787993825:3082518..3082680mRNAPaHa11g01240.1
CDS
part_ofPaHa11g01240.1-CDS-11-1787993825:3083155..3083403mRNAPaHa11g01240.1
exon
part_ofPaHa11g01240.1-exon-11-1787993825:3074780..3074859mRNAPaHa11g01240.1
exon
part_ofPaHa11g01240.1-exon-11-1787993825:3076459..3076527mRNAPaHa11g01240.1
exon
part_ofPaHa11g01240.1-exon-11-1787993825:3081258..3081335mRNAPaHa11g01240.1
exon
part_ofPaHa11g01240.1-exon-11-1787993825:3082518..3082680mRNAPaHa11g01240.1
exon
part_ofPaHa11g01240.1-exon-11-1787993825:3083155..3083403mRNAPaHa11g01240.1
