Feature identity
- Identifier
- Chr08.g63148
- Feature type
- gene
- Genome collection
- Anise
- Organism
- Persea americana-Anise
- Sequence length
- 5,186 bp
- Genomic location
- Chr08:59,925,881–59,931,066
- Strand
- +
Anise · gene
Chr08.g63148
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 5,186
- bp
- Chr08:59,925,881–59,931,066
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
- eggNOG
- 218851.Aquca_011_00170.1,K,[Involved in mRNA export coupled transcription activation by association with both the TREX-2 and the SAGA complexes. The transcription regulatory histone acetylation (HAT) complex SAGA is a multiprotein complex that activates transcription by remodeling chromatin and mediating histone acetylation and deubiquitination. Within the SAGA complex, participates to a subcomplex that specifically deubiquitinates histones. The SAGA complex is recruited to specific gene promoters by activators, where it is required for transcription. The TREX-2 complex functions in docking export-competent ribonucleoprotein particles (mRNPs) to the nuclear entrance of the nuclear pore complex (nuclear basket). TREX-2 participates in mRNA export and accurate chromatin positioning in the nucleus by tethering genes to the nuclear periphery]
- KEGG
- K11368 | ENY2, DC6, SUS1
- NR
- RWR87052.1 transcription and mRNA export factor SUS1 [Cinnamomum micranthum f. kanehirae]
- Swiss-Prot
- Q6NQ54.1 RecName: Full=Transcription and mRNA export factor ENY2; AltName: Full=Enhancer of yellow 2 transcription factor homolog [Arabidopsis thaliana]
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
mRNAChr08.g63148.m1
part_ofgeneChr08.g63148
