Computational annotationFunctional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
- eggNOG
- 4432.XP_010247057.1,O,[E3 ubiquitin-protein ligase]
- Gene Ontology
- E3 ubiquitin-protein ligase | GO:0000165//MAPK cascade; GO:0000209//protein polyubiquitination; GO:0006355//regulation of transcription, DNA-templated; GO:0006357//regulation of transcription from RNA polymerase II promoter; GO:0006464//cellular protein modification process; GO:0006468//protein phosphorylation; GO:0006508//proteolysis; GO:0006511//ubiquitin-dependent protein catabolic process; GO:0006793//phosphorus metabolic process; GO:0006796//phosphate-containing compound metabolic process; GO:0006807//nitrogen compound metabolic process; GO:0006950//response to stress; GO:0007154//cell communication; GO:0007165//signal transduction; GO:0007166//cell surface receptor signaling pathway; GO:0007254//JNK cascade; GO:0008150//biological_process; GO:0008152//metabolic process; GO:0008284//positive regulation of cell proliferation; GO:0009056//catabolic process; GO:0009057//macromolecule catabolic process; GO:0009314//response to radiation; GO:0009628//response to abiotic stimulus; GO:0009719//response to endogenous stimulus; GO:0009725//response to hormone; GO:0009889//regulation of biosynthetic process; GO:0009891//positive regulation of biosynthetic process; GO:0009893//positive regulation of metabolic process; GO:0009966//regulation of signal transduction; GO:0009967//positive regulation of signal transduction; GO:0009987//cellular process; GO:0010033//response to organic substance; GO:0010035//response to inorganic substance; GO:0010212//response to ionizing radiation; GO:0010332//response to gamma radiation; GO:0010468//regulation of gene expression; GO:0010498//proteasomal protein catabolic process; GO:0010556//regulation of macromolecule biosynthetic process; GO:0010557//positive regulation of macromolecule biosynthetic process; GO:0010564//regulation of cell cycle process; GO:0010604//positive regulation of macromolecule metabolic process; GO:0010628//positive regulation of gene expression; GO:0010646//regulation of cell communication; GO:0010647//positive regulation of cell communication; GO:0010941//regulation of cell death; GO:0014070//response to organic cyclic compound; GO:0016310//phosphorylation; GO:0016567//protein ubiquitination; GO:0019219//regulation of nucleobase-containing compound metabolic process; GO:0019221//cytokine-mediated signaling pathway; GO:0019222//regulation of metabolic process; GO:0019538//protein metabolic process; GO:0019941//modification-dependent protein catabolic process; GO:0023014//signal transduction by protein phosphorylation; GO:0023051//regulation of signaling; GO:0023052//signaling; GO:0023056//positive regulation of signaling; GO:0030163//protein catabolic process; GO:0031098//stress-activated protein kinase signaling cascade; GO:0031323//regulation of cellular metabolic process; GO:0031325//positive regulation of cellular metabolic process; GO:0031326//regulation of cellular biosynthetic process; GO:0031328//positive regulation of cellular biosynthetic process; GO:0032446//protein modification by small protein conjugation; GO:0032870//cellular response to hormone stimulus; GO:0032886//regulation of microtubule-based process; GO:0033043//regulation of organelle organization; GO:0033044//regulation of chromosome organization; GO:0033554//cellular response to stress; GO:0033574//response to testosterone; GO:0033993//response to lipid; GO:0034097//response to cytokine; GO:0035556//intracellular signal transduction; GO:0035690//cellular response to drug; GO:0036211//protein modification process; GO:0042127//regulation of cell proliferation; GO:0042221//response to chemical; GO:0042493//response to drug; GO:0043122//regulation of I-kappaB kinase/NF-kappaB signaling; GO:0043123//positive regulation of I-kappaB kinase/NF-kappaB signaling; GO:0043161//proteasome-mediated ubiquitin-dependent protein catabolic process; GO:0043170//macromolecule metabolic process; GO:0043254//regulation of protein complex assembly; GO:0043412//macromolecule modification; GO:0043632//modification-dependent macromolecule catabolic process; GO:0044087//regulation of cellular component biogenesis; GO:0044093//positive regulation of molecular function; GO:0044237//cellular metabolic process; GO:0044238//primary metabolic process; GO:0044248//cellular catabolic process; GO:0044257//cellular protein catabolic process; GO:0044260//cellular macromolecule metabolic process; GO:0044265//cellular macromolecule catabolic process; GO:0044267//cellular protein metabolic process; GO:0045893//positive regulation of transcription, DNA-templated; GO:0045935//positive regulation of nucleobase-containing compound metabolic process; GO:0045944//positive regulation of transcription from RNA polymerase II promoter; GO:0046685//response to arsenic-containing substance; GO:0048518//positive regulation of biological process; GO:0048519//negative regulation of biological process; GO:0048522//positive regulation of cellular process; GO:0048523//negative regulation of cellular process; GO:0048583//regulation of response to stimulus; GO:0048584//positive regulation of response to stimulus; GO:0048660//regulation of smooth muscle cell proliferation; GO:0048661//positive regulation of smooth muscle cell proliferation; GO:0050789//regulation of biological process; GO:0050794//regulation of cellular process; GO:0050896//response to stimulus; GO:0051090//regulation of sequence-specific DNA binding transcription factor activity; GO:0051091//positive regulation of sequence-specific DNA binding transcription factor activity; GO:0051092//positive regulation of NF-kappaB transcription factor activity; GO:0051128//regulation of cellular component organization; GO:0051171//regulation of nitrogen compound metabolic process; GO:0051173//positive regulation of nitrogen compound metabolic process; GO:0051252//regulation of RNA metabolic process; GO:0051254//positive regulation of RNA metabolic process; GO:0051403//stress-activated MAPK cascade; GO:0051493//regulation of cytoskeleton organization; GO:0051603//proteolysis involved in cellular protein catabolic process; GO:0051716//cellular response to stimulus; GO:0051726//regulation of cell cycle; GO:0051865//protein autoubiquitination; GO:0060255//regulation of macromolecule metabolic process; GO:0060548//negative regulation of cell death; GO:0065007//biological regulation; GO:0065009//regulation of molecular function; GO:0070498//interleukin-1-mediated signaling pathway; GO:0070507//regulation of microtubule cytoskeleton organization; GO:0070534//protein K63-linked ubiquitination; GO:0070555//response to interleukin-1; GO:0070647//protein modification by small protein conjugation or removal; GO:0070887//cellular response to chemical stimulus; GO:0070936//protein K48-linked ubiquitination; GO:0070979//protein K11-linked ubiquitination; GO:0071214//cellular response to abiotic stimulus; GO:0071241//cellular response to inorganic substance; GO:0071310//cellular response to organic substance; GO:0071345//cellular response to cytokine stimulus; GO:0071347//cellular response to interleukin-1; GO:0071394//cellular response to testosterone stimulus; GO:0071396//cellular response to lipid; GO:0071407//cellular response to organic cyclic compound; GO:0071478//cellular response to radiation; GO:0071479//cellular response to ionizing radiation; GO:0071480//cellular response to gamma radiation; GO:0071495//cellular response to endogenous stimulus; GO:0071704//organic substance metabolic process; GO:0072710//response to hydroxyurea; GO:0072711//cellular response to hydroxyurea; GO:0080090//regulation of primary metabolic process; GO:0085020//protein K6-linked ubiquitination; GO:0090169//regulation of spindle assembly; GO:0090224//regulation of spindle organization; GO:0090230//regulation of centromere complex assembly; GO:0090234//regulation of kinetochore assembly; GO:0097327//response to antineoplastic agent; GO:0097329//response to antimetabolite; GO:1901564//organonitrogen compound metabolic process; GO:1901565//organonitrogen compound catabolic process; GO:1901575//organic substance catabolic process; GO:1901654//response to ketone; GO:1901655//cellular response to ketone; GO:1901698//response to nitrogen compound; GO:1901699//cellular response to nitrogen compound; GO:1901700//response to oxygen-containing compound; GO:1901701//cellular response to oxygen-containing compound; GO:1902115//regulation of organelle assembly; GO:1902531//regulation of intracellular signal transduction; GO:1902533//positive regulation of intracellular signal transduction; GO:1902680//positive regulation of RNA biosynthetic process; GO:1903506//regulation of nucleic acid-templated transcription; GO:1903508//positive regulation of nucleic acid-templated transcription; GO:2000112//regulation of cellular macromolecule biosynthetic process; GO:2001141//regulation of RNA biosynthetic process | GO:0005575//cellular_component; GO:0005622//intracellular; GO:0005623//cell; GO:0005634//nucleus; GO:0005654//nucleoplasm; GO:0005737//cytoplasm; GO:0005811//lipid particle; GO:0005829//cytosol; GO:0031974//membrane-enclosed lumen; GO:0031981//nuclear lumen; GO:0032991//macromolecular complex; GO:0043226//organelle; GO:0043227//membrane-bounded organelle; GO:0043228//non-membrane-bounded organelle; GO:0043229//intracellular organelle; GO:0043231//intracellular membrane-bounded organelle; GO:0043232//intracellular non-membrane-bounded organelle; GO:0043233//organelle lumen; GO:0044422//organelle part; GO:0044424//intracellular part; GO:0044428//nuclear part; GO:0044444//cytoplasmic part; GO:0044446//intracellular organelle part; GO:0044464//cell part; GO:0070013//intracellular organelle lumen | GO:0003674//molecular_function; GO:0003676//nucleic acid binding; GO:0003677//DNA binding; GO:0003682//chromatin binding; GO:0003824//catalytic activity; GO:0004842//ubiquitin-protein transferase activity; GO:0005102//receptor binding; GO:0005488//binding; GO:0005515//protein binding; GO:0008134//transcription factor binding; GO:0008270//zinc ion binding; GO:0016740//transferase activity; GO:0017025//TBP-class protein binding; GO:0019787//ubiquitin-like protein transferase activity; GO:0019899//enzyme binding; GO:0030331//estrogen receptor binding; GO:0031491//nucleosome binding; GO:0031624//ubiquitin conjugating enzyme binding; GO:0032182//ubiquitin-like protein binding; GO:0032183//SUMO binding; GO:0032184//SUMO polymer binding; GO:0033142//progesterone receptor binding; GO:0035257//nuclear hormone receptor binding; GO:0035258//steroid hormone receptor binding; GO:0042802//identical protein binding; GO:0042803//protein homodimerization activity; GO:0043167//ion binding; GO:0043169//cation binding; GO:0044390//ubiquitin-like protein conjugating enzyme binding; GO:0044877//macromolecular complex binding; GO:0046872//metal ion binding; GO:0046914//transition metal ion binding; GO:0046983//protein dimerization activity; GO:0050681//androgen receptor binding; GO:0051427//hormone receptor binding; GO:0061630//ubiquitin protein ligase activity; GO:0061659//ubiquitin-like protein ligase activity; GO:0097159//organic cyclic compound binding; GO:1901363//heterocyclic compound binding
- KEGG
- K22651 | RNF4
- NR
- RWR87088.1 hypothetical protein CKAN_01601900 [Cinnamomum micranthum f. kanehirae]