Feature identity
- Identifier
- PaHa10g20380.1
- Feature type
- mRNA
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 519 bp
- Genomic location
- 10:50,822,843–50,824,108
- Strand
- +
Hass · mRNA
PaHa10g20380.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 519
- bp
- 10:50,822,843–50,824,108
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: PaHa10g20380
- eggNOG
- Preferred name: IAA31 | Seed ortholog: 337451.A0A3S3P6C9 | COG: S | eggNOG OG: AUX_IAA@131567|A-1*, AUX_IAA@2759|X-5, AUX_IAA@3398|BO-8
- Gene Ontology
- GO:0000976 transcription cis-regulatory region binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0009630 gravitropism; GO:0009733 response to auxin; GO:0042802 identical protein binding; GO:0048364 root development; GO:0048367 shoot system development
- KEGG
- KO: K14484 | Pathway: 04075 | BRITE: 00001
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePaHa10g20380.1-protein
derives_frommRNAPaHa10g20380.1
mRNAPaHa10g20380.1
part_ofgenePaHa10g20380
CDS
part_ofPaHa10g20380.1-CDS-10-1787993825:50822843..50823000mRNAPaHa10g20380.1
CDS
part_ofPaHa10g20380.1-CDS-10-1787993825:50823373..50823581mRNAPaHa10g20380.1
CDS
part_ofPaHa10g20380.1-CDS-10-1787993825:50823846..50823942mRNAPaHa10g20380.1
CDS
part_ofPaHa10g20380.1-CDS-10-1787993825:50824054..50824108mRNAPaHa10g20380.1
exon
part_ofPaHa10g20380.1-exon-10-1787993825:50822843..50823000mRNAPaHa10g20380.1
exon
part_ofPaHa10g20380.1-exon-10-1787993825:50823373..50823581mRNAPaHa10g20380.1
exon
part_ofPaHa10g20380.1-exon-10-1787993825:50823846..50823942mRNAPaHa10g20380.1
exon
part_ofPaHa10g20380.1-exon-10-1787993825:50824054..50824108mRNAPaHa10g20380.1
