Feature identity
- Identifier
- PaHa10g18280.1
- Feature type
- mRNA
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 420 bp
- Genomic location
- 10:47,539,429–47,539,848
- Strand
- +
Hass · mRNA
PaHa10g18280.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 420
- bp
- 10:47,539,429–47,539,848
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: PaHa10g18280
- eggNOG
- Preferred name: OBF1 | Seed ortholog: 337451.A0A3S3NTW1 | COG: S | eggNOG OG: bZIP_1@131567|iz-20, bZIP_1@33090|Buj-30, bZIP_1@3398|CPH-31
- Gene Ontology
- GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0006971 hypotonic response; GO:0009267 cellular response to starvation; GO:0043565 sequence-specific DNA binding; GO:0045893 positive regulation of DNA-templated transcription; GO:0046982 protein heterodimerization activity; GO:2000693 positive regulation of seed maturation
- KEGG
- KO: K25786 | Pathway: 04022, 04024, 04148, 04151, 04152, 04211, 04261, 04380, 04612, 04668, 04710, 04713, 04714, 04725, 04728, 04911, 04915, 04916, 04918, 04922, 04924, 04925, 04926, 04927, 04928, 04931, 04934, 04935, 04962, 05016, 05020, 05030, 05031, 05034, 05152, 05161, 05163, 05165, 05166, 05167, 05202, 05203, 05207, 05215 | BRITE: 00001, 03000
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePaHa10g18280.1-protein
derives_frommRNAPaHa10g18280.1
mRNAPaHa10g18280.1
part_ofgenePaHa10g18280
CDS
part_ofPaHa10g18280.1-CDS-10-1787993825:47539429..47539848mRNAPaHa10g18280.1
exon
part_ofPaHa10g18280.1-exon-10-1787993825:47539429..47539848mRNAPaHa10g18280.1
