Feature identity
- Identifier
- PaHa01g30490.1
- Feature type
- mRNA
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 273 bp
- Genomic location
- 1:79,089,603–79,090,412
- Strand
- +
Hass · mRNA
PaHa01g30490.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 273
- bp
- 1:79,089,603–79,090,412
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: PaHa01g30490
- eggNOG
- Preferred name: ACBP6 | Seed ortholog: 337451.A0A443PTR3 | COG: S | eggNOG OG: ACBP@131567|F-3, ACBP@2759|Bo-8, Kelch_3@131567|AJ-7, Kelch_3@3398|wD-19, Kelch_4@131221|CIq-24, Kelch_4@131567|ET-9, Kelch_4@3193|CxH-26, Kelch_6@131567|AE-6, Kelch_6@2759|LI-13, Kelch_6@3398|ANs-22
- Gene Ontology
- GO:0000062 fatty-acyl-CoA binding; GO:0001666 response to hypoxia; GO:0005515 protein binding; GO:0005777 peroxisome; GO:0006869 lipid transport; GO:0009416 response to light stimulus; GO:0009723 response to ethylene; GO:0009753 response to jasmonic acid
- KEGG
- EC: ec:2.1.1.290, ec:2.3.1.231 | KO: K08762, K12115, K14538, K14966, K15451, K20285, K23330, K25807, K25808, K25810, K27390, K27751 | Pathway: 03008, 03083, 04212, 04712, 04980, 05168 | BRITE: 00001, 01000, 01009, 03009, 03016, 03029, 03036, 04052, 04121, 04131
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePaHa01g30490.1-protein
derives_frommRNAPaHa01g30490.1
mRNAPaHa01g30490.1
part_ofgenePaHa01g30490
CDS
part_ofPaHa01g30490.1-CDS-1-1787993825:79089603..79089676mRNAPaHa01g30490.1
CDS
part_ofPaHa01g30490.1-CDS-1-1787993825:79090128..79090253mRNAPaHa01g30490.1
CDS
part_ofPaHa01g30490.1-CDS-1-1787993825:79090340..79090412mRNAPaHa01g30490.1
exon
part_ofPaHa01g30490.1-exon-1-1787993825:79089603..79089676mRNAPaHa01g30490.1
exon
part_ofPaHa01g30490.1-exon-1-1787993825:79090128..79090253mRNAPaHa01g30490.1
exon
part_ofPaHa01g30490.1-exon-1-1787993825:79090340..79090412mRNAPaHa01g30490.1
