Feature identity
- Identifier
- PaHa10g17790.1
- Feature type
- mRNA
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 1,824 bp
- Genomic location
- 10:46,924,706–46,930,514
- Strand
- −
Hass · mRNA
PaHa10g17790.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 1,824
- bp
- 10:46,924,706–46,930,514
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: PaHa10g17790
- eggNOG
- Preferred name: LOC103634528 | Seed ortholog: 337451.A0A3S3R4B5 | COG: S | eggNOG OG: Calmod_bind_C@131567|A-1*, Calmod_bind_M@131567|A-1*, Calmod_bind_M@35493|Bb-8, Calmodulin_bind@131567|A-1*, Calmodulin_bind@33090|h-6
- Gene Ontology
- GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005516 calmodulin binding; GO:0005634 nucleus; GO:0043565 sequence-specific DNA binding; GO:0098542 defense response to other organism
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePaHa10g17790.1-protein
derives_frommRNAPaHa10g17790.1
mRNAPaHa10g17790.1
part_ofgenePaHa10g17790
CDS
part_ofPaHa10g17790.1-CDS-10-1787993825:46924706..46925286mRNAPaHa10g17790.1
CDS
part_ofPaHa10g17790.1-CDS-10-1787993825:46925396..46925564mRNAPaHa10g17790.1
CDS
part_ofPaHa10g17790.1-CDS-10-1787993825:46926154..46926357mRNAPaHa10g17790.1
CDS
part_ofPaHa10g17790.1-CDS-10-1787993825:46926486..46926646mRNAPaHa10g17790.1
CDS
part_ofPaHa10g17790.1-CDS-10-1787993825:46927239..46927720mRNAPaHa10g17790.1
CDS
part_ofPaHa10g17790.1-CDS-10-1787993825:46928730..46928782mRNAPaHa10g17790.1
CDS
part_ofPaHa10g17790.1-CDS-10-1787993825:46930250..46930328mRNAPaHa10g17790.1
CDS
part_ofPaHa10g17790.1-CDS-10-1787993825:46930420..46930514mRNAPaHa10g17790.1
exon
part_ofPaHa10g17790.1-exon-10-1787993825:46924706..46925286mRNAPaHa10g17790.1
exon
part_ofPaHa10g17790.1-exon-10-1787993825:46925396..46925564mRNAPaHa10g17790.1
exon
part_ofPaHa10g17790.1-exon-10-1787993825:46926154..46926357mRNAPaHa10g17790.1
exon
part_ofPaHa10g17790.1-exon-10-1787993825:46926486..46926646mRNAPaHa10g17790.1
exon
part_ofPaHa10g17790.1-exon-10-1787993825:46927239..46927720mRNAPaHa10g17790.1
exon
part_ofPaHa10g17790.1-exon-10-1787993825:46928730..46928782mRNAPaHa10g17790.1
exon
part_ofPaHa10g17790.1-exon-10-1787993825:46930250..46930328mRNAPaHa10g17790.1
exon
part_ofPaHa10g17790.1-exon-10-1787993825:46930420..46930514mRNAPaHa10g17790.1
