Feature identity
- Identifier
- PaHa10g17070.1
- Feature type
- mRNA
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 2,046 bp
- Genomic location
- 10:46,039,170–46,052,514
- Strand
- −
Hass · mRNA
PaHa10g17070.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 2,046
- bp
- 10:46,039,170–46,052,514
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: PaHa10g17070
- eggNOG
- Preferred name: LOC101258102 | Seed ortholog: 337451.A0A3S3MX32 | COG: COG1250 | eggNOG OG: 3HCDH@131567|LT-12, 3HCDH@35493|BGn-21, 3HCDH_N@131567|GO-11, 3HCDH_N@3398|Bdi-24, 3HCDH_N@35493|AgY-21, ECH_1@131567|Bgt-21, ECH_1@3398|UPD-34, ECH_1@35493|MUt-30
- Gene Ontology
- GO:0003857 (3S)-3-hydroxyacyl-CoA dehydrogenase (NAD+) activity; GO:0004165 delta(3)-delta(2)-enoyl-CoA isomerase activity; GO:0004300 enoyl-CoA hydratase activity; GO:0005730 nucleolus; GO:0005737 cytoplasm; GO:0005777 peroxisome; GO:0005829 cytosol; GO:0006635 fatty acid beta-oxidation; GO:0008692 3-hydroxybutyryl-CoA epimerase activity; GO:0009505 plant-type cell wall; GO:0009506 plasmodesma; GO:0009514 glyoxysome; GO:0018812 3-hydroxyacyl-CoA dehydratase activity
- KEGG
- EC: ec:1.1.1.211, ec:1.1.1.35, ec:4.2.1.17 | KO: K10527 | Pathway: 00071, 00592, 01100, 01110, 01212 | Module: M00087, M00113 | BRITE: 00001, 01000
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePaHa10g17070.1-protein
derives_frommRNAPaHa10g17070.1
mRNAPaHa10g17070.1
part_ofgenePaHa10g17070
CDS
part_ofPaHa10g17070.1-CDS-10-1787993825:46039170..46039205mRNAPaHa10g17070.1
CDS
part_ofPaHa10g17070.1-CDS-10-1787993825:46039280..46039418mRNAPaHa10g17070.1
CDS
part_ofPaHa10g17070.1-CDS-10-1787993825:46039498..46039646mRNAPaHa10g17070.1
CDS
part_ofPaHa10g17070.1-CDS-10-1787993825:46040979..46041100mRNAPaHa10g17070.1
CDS
part_ofPaHa10g17070.1-CDS-10-1787993825:46041560..46041681mRNAPaHa10g17070.1
CDS
part_ofPaHa10g17070.1-CDS-10-1787993825:46041893..46041939mRNAPaHa10g17070.1
CDS
part_ofPaHa10g17070.1-CDS-10-1787993825:46042053..46042146mRNAPaHa10g17070.1
CDS
part_ofPaHa10g17070.1-CDS-10-1787993825:46042572..46042735mRNAPaHa10g17070.1
CDS
part_ofPaHa10g17070.1-CDS-10-1787993825:46042837..46042958mRNAPaHa10g17070.1
CDS
part_ofPaHa10g17070.1-CDS-10-1787993825:46043071..46043245mRNAPaHa10g17070.1
CDS
part_ofPaHa10g17070.1-CDS-10-1787993825:46044559..46044645mRNAPaHa10g17070.1
CDS
part_ofPaHa10g17070.1-CDS-10-1787993825:46044726..46045028mRNAPaHa10g17070.1
CDS
part_ofPaHa10g17070.1-CDS-10-1787993825:46045164..46045219mRNAPaHa10g17070.1
CDS
part_ofPaHa10g17070.1-CDS-10-1787993825:46048335..46048416mRNAPaHa10g17070.1
CDS
part_ofPaHa10g17070.1-CDS-10-1787993825:46049914..46049981mRNAPaHa10g17070.1
CDS
part_ofPaHa10g17070.1-CDS-10-1787993825:46050073..46050129mRNAPaHa10g17070.1
CDS
part_ofPaHa10g17070.1-CDS-10-1787993825:46050214..46050273mRNAPaHa10g17070.1
CDS
part_ofPaHa10g17070.1-CDS-10-1787993825:46050404..46050475mRNAPaHa10g17070.1
CDS
part_ofPaHa10g17070.1-CDS-10-1787993825:46052424..46052514mRNAPaHa10g17070.1
exon
part_ofPaHa10g17070.1-exon-10-1787993825:46039170..46039205mRNAPaHa10g17070.1
exon
part_ofPaHa10g17070.1-exon-10-1787993825:46039280..46039418mRNAPaHa10g17070.1
exon
part_ofPaHa10g17070.1-exon-10-1787993825:46039498..46039646mRNAPaHa10g17070.1
exon
part_ofPaHa10g17070.1-exon-10-1787993825:46040979..46041100mRNAPaHa10g17070.1
exon
part_ofPaHa10g17070.1-exon-10-1787993825:46041560..46041681mRNAPaHa10g17070.1
exon
part_ofPaHa10g17070.1-exon-10-1787993825:46041893..46041939mRNAPaHa10g17070.1
exon
part_ofPaHa10g17070.1-exon-10-1787993825:46042053..46042146mRNAPaHa10g17070.1
exon
part_ofPaHa10g17070.1-exon-10-1787993825:46042572..46042735mRNAPaHa10g17070.1
exon
part_ofPaHa10g17070.1-exon-10-1787993825:46042837..46042958mRNAPaHa10g17070.1
exon
part_ofPaHa10g17070.1-exon-10-1787993825:46043071..46043245mRNAPaHa10g17070.1
exon
part_ofPaHa10g17070.1-exon-10-1787993825:46044559..46044645mRNAPaHa10g17070.1
exon
part_ofPaHa10g17070.1-exon-10-1787993825:46044726..46045028mRNAPaHa10g17070.1
exon
part_ofPaHa10g17070.1-exon-10-1787993825:46045164..46045219mRNAPaHa10g17070.1
exon
part_ofPaHa10g17070.1-exon-10-1787993825:46048335..46048416mRNAPaHa10g17070.1
exon
part_ofPaHa10g17070.1-exon-10-1787993825:46049914..46049981mRNAPaHa10g17070.1
exon
part_ofPaHa10g17070.1-exon-10-1787993825:46050073..46050129mRNAPaHa10g17070.1
exon
part_ofPaHa10g17070.1-exon-10-1787993825:46050214..46050273mRNAPaHa10g17070.1
exon
part_ofPaHa10g17070.1-exon-10-1787993825:46050404..46050475mRNAPaHa10g17070.1
exon
part_ofPaHa10g17070.1-exon-10-1787993825:46052424..46052514mRNAPaHa10g17070.1
