Feature identity
- Identifier
- PaHa10g14730.1
- Feature type
- mRNA
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 465 bp
- Genomic location
- 10:42,482,527–42,488,843
- Strand
- +
Hass · mRNA
PaHa10g14730.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 465
- bp
- 10:42,482,527–42,488,843
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: PaHa10g14730
- eggNOG
- Preferred name: LOC103719785 | Seed ortholog: 337451.A0A3S3R1S2 | COG: COG2036 | eggNOG OG: CBFD_NFYB_HMF@131567|BS-10, CBFD_NFYB_HMF@2759|IE-16
- Gene Ontology
- GO:0000976 transcription cis-regulatory region binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0006355 regulation of DNA-templated transcription
- KEGG
- KO: K21751 | BRITE: 00001, 03021, 03036
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePaHa10g14730.1-protein
derives_frommRNAPaHa10g14730.1
mRNAPaHa10g14730.1
part_ofgenePaHa10g14730
CDS
part_ofPaHa10g14730.1-CDS-10-1787993825:42482527..42482581mRNAPaHa10g14730.1
CDS
part_ofPaHa10g14730.1-CDS-10-1787993825:42483866..42483955mRNAPaHa10g14730.1
CDS
part_ofPaHa10g14730.1-CDS-10-1787993825:42487245..42487339mRNAPaHa10g14730.1
CDS
part_ofPaHa10g14730.1-CDS-10-1787993825:42488192..42488260mRNAPaHa10g14730.1
CDS
part_ofPaHa10g14730.1-CDS-10-1787993825:42488688..42488843mRNAPaHa10g14730.1
exon
part_ofPaHa10g14730.1-exon-10-1787993825:42482527..42482581mRNAPaHa10g14730.1
exon
part_ofPaHa10g14730.1-exon-10-1787993825:42483866..42483955mRNAPaHa10g14730.1
exon
part_ofPaHa10g14730.1-exon-10-1787993825:42487245..42487339mRNAPaHa10g14730.1
exon
part_ofPaHa10g14730.1-exon-10-1787993825:42488192..42488260mRNAPaHa10g14730.1
exon
part_ofPaHa10g14730.1-exon-10-1787993825:42488688..42488843mRNAPaHa10g14730.1
