Feature identity
- Identifier
- PaHa10g14090.1
- Feature type
- mRNA
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 573 bp
- Genomic location
- 10:41,397,672–41,405,576
- Strand
- +
Hass · mRNA
PaHa10g14090.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 573
- bp
- 10:41,397,672–41,405,576
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: PaHa10g14090
- eggNOG
- Preferred name: MYB305 | Seed ortholog: 337451.A0A3S3NFB4 | COG: S | eggNOG OG: Myb_DNA-binding@131567|AOS-27, Myb_DNA-binding@3398|GNp-39, Myb_DNA-binding@35493|EcV-37
- Gene Ontology
- GO:0000976 transcription cis-regulatory region binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0009740 gibberellic acid mediated signaling pathway; GO:0009753 response to jasmonic acid; GO:0009867 jasmonic acid mediated signaling pathway; GO:0048443 stamen development; GO:0080086 stamen filament development; GO:1990841 promoter-specific chromatin binding
- KEGG
- EC: ec:1.17.99.9 | KO: K09422 | Pathway: 00190, 00860, 01100, 01110, 01240, 04626 | Module: M00154 | BRITE: 00001, 03000
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePaHa10g14090.1-protein
derives_frommRNAPaHa10g14090.1
mRNAPaHa10g14090.1
part_ofgenePaHa10g14090
CDS
part_ofPaHa10g14090.1-CDS-10-1787993825:41397672..41397807mRNAPaHa10g14090.1
CDS
part_ofPaHa10g14090.1-CDS-10-1787993825:41397976..41398105mRNAPaHa10g14090.1
CDS
part_ofPaHa10g14090.1-CDS-10-1787993825:41405270..41405576mRNAPaHa10g14090.1
exon
part_ofPaHa10g14090.1-exon-10-1787993825:41397672..41397807mRNAPaHa10g14090.1
exon
part_ofPaHa10g14090.1-exon-10-1787993825:41397976..41398105mRNAPaHa10g14090.1
exon
part_ofPaHa10g14090.1-exon-10-1787993825:41405270..41405576mRNAPaHa10g14090.1
