Feature identity
- Identifier
- PaHa10g13670.1
- Feature type
- mRNA
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 1,116 bp
- Genomic location
- 10:40,734,159–40,741,411
- Strand
- −
Hass · mRNA
PaHa10g13670.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 1,116
- bp
- 10:40,734,159–40,741,411
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: PaHa10g13670
- eggNOG
- Preferred name: LOC123094739 | Seed ortholog: 337451.A0A443PT27 | COG: S | eggNOG OG: SRF-TF@131567|A-1*, SRF-TF@1437183|CEp-29, SRF-TF@2759|C-2!, SRF-TF@3398|AOO-23, SRF-TF@58023|ai-19
- Gene Ontology
- GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0009555 pollen development; GO:0010152 pollen maturation; GO:0080092 regulation of pollen tube growth
- KEGG
- KO: K04378, K04454, K09260, K09261, K09262, K09264, K09265, K12412, K19807, K19808, K27808 | Pathway: 04010, 04011, 04013, 04022, 04111, 04371, 04921, 04928, 05166, 05202, 05203, 05418 | BRITE: 00001, 03000, 03021, 04131
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePaHa10g13670.1-protein
derives_frommRNAPaHa10g13670.1
mRNAPaHa10g13670.1
part_ofgenePaHa10g13670
CDS
part_ofPaHa10g13670.1-CDS-10-1787993825:40734159..40734311mRNAPaHa10g13670.1
CDS
part_ofPaHa10g13670.1-CDS-10-1787993825:40734749..40735112mRNAPaHa10g13670.1
CDS
part_ofPaHa10g13670.1-CDS-10-1787993825:40736875..40737002mRNAPaHa10g13670.1
CDS
part_ofPaHa10g13670.1-CDS-10-1787993825:40737114..40737161mRNAPaHa10g13670.1
CDS
part_ofPaHa10g13670.1-CDS-10-1787993825:40738591..40738687mRNAPaHa10g13670.1
CDS
part_ofPaHa10g13670.1-CDS-10-1787993825:40740315..40740376mRNAPaHa10g13670.1
CDS
part_ofPaHa10g13670.1-CDS-10-1787993825:40740822..40740840mRNAPaHa10g13670.1
CDS
part_ofPaHa10g13670.1-CDS-10-1787993825:40740942..40741001mRNAPaHa10g13670.1
CDS
part_ofPaHa10g13670.1-CDS-10-1787993825:40741227..40741411mRNAPaHa10g13670.1
exon
part_ofPaHa10g13670.1-exon-10-1787993825:40734159..40734311mRNAPaHa10g13670.1
exon
part_ofPaHa10g13670.1-exon-10-1787993825:40734749..40735112mRNAPaHa10g13670.1
exon
part_ofPaHa10g13670.1-exon-10-1787993825:40736875..40737002mRNAPaHa10g13670.1
exon
part_ofPaHa10g13670.1-exon-10-1787993825:40737114..40737161mRNAPaHa10g13670.1
exon
part_ofPaHa10g13670.1-exon-10-1787993825:40738591..40738687mRNAPaHa10g13670.1
exon
part_ofPaHa10g13670.1-exon-10-1787993825:40740315..40740376mRNAPaHa10g13670.1
exon
part_ofPaHa10g13670.1-exon-10-1787993825:40740822..40740840mRNAPaHa10g13670.1
exon
part_ofPaHa10g13670.1-exon-10-1787993825:40740942..40741001mRNAPaHa10g13670.1
exon
part_ofPaHa10g13670.1-exon-10-1787993825:40741227..40741411mRNAPaHa10g13670.1
