Feature identity
- Identifier
- PaHa10g13060.1
- Feature type
- mRNA
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 1,419 bp
- Genomic location
- 10:39,705,040–39,710,771
- Strand
- −
Hass · mRNA
PaHa10g13060.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 1,419
- bp
- 10:39,705,040–39,710,771
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: PaHa10g13060
- eggNOG
- Preferred name: SARD1 | Seed ortholog: 337451.A0A3S3NF65 | COG: S | eggNOG OG: Calmod_bind_C@131567|A-1*, Calmod_bind_C@1437183|AR-8, Calmod_bind_C@35493|r-7, Calmod_bind_M@131567|A-1*, Calmod_bind_M@1437183|Eg-11, Calmod_bind_M@35493|CP-9, Calmodulin_bind@131567|A-1*, Calmodulin_bind@1437183|GP-13, Calmodulin_bind@33090|Bf-10
- Gene Ontology
- GO:0002229 defense response to oomycetes; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0006355 regulation of DNA-templated transcription; GO:0009617 response to bacterium; GO:0010112 regulation of systemic acquired resistance; GO:0010224 response to UV-B; GO:0042742 defense response to bacterium; GO:0043565 sequence-specific DNA binding; GO:0071219 cellular response to molecule of bacterial origin; GO:0080142 regulation of salicylic acid biosynthetic process; GO:1900426 positive regulation of defense response to bacterium
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePaHa10g13060.1-protein
derives_frommRNAPaHa10g13060.1
mRNAPaHa10g13060.1
part_ofgenePaHa10g13060
CDS
part_ofPaHa10g13060.1-CDS-10-1787993825:39705040..39705293mRNAPaHa10g13060.1
CDS
part_ofPaHa10g13060.1-CDS-10-1787993825:39705846..39705939mRNAPaHa10g13060.1
CDS
part_ofPaHa10g13060.1-CDS-10-1787993825:39706358..39706552mRNAPaHa10g13060.1
CDS
part_ofPaHa10g13060.1-CDS-10-1787993825:39706703..39706863mRNAPaHa10g13060.1
CDS
part_ofPaHa10g13060.1-CDS-10-1787993825:39708331..39708824mRNAPaHa10g13060.1
CDS
part_ofPaHa10g13060.1-CDS-10-1787993825:39709228..39709283mRNAPaHa10g13060.1
CDS
part_ofPaHa10g13060.1-CDS-10-1787993825:39709902..39709977mRNAPaHa10g13060.1
CDS
part_ofPaHa10g13060.1-CDS-10-1787993825:39710683..39710771mRNAPaHa10g13060.1
exon
part_ofPaHa10g13060.1-exon-10-1787993825:39705040..39705293mRNAPaHa10g13060.1
exon
part_ofPaHa10g13060.1-exon-10-1787993825:39705846..39705939mRNAPaHa10g13060.1
exon
part_ofPaHa10g13060.1-exon-10-1787993825:39706358..39706552mRNAPaHa10g13060.1
exon
part_ofPaHa10g13060.1-exon-10-1787993825:39706703..39706863mRNAPaHa10g13060.1
exon
part_ofPaHa10g13060.1-exon-10-1787993825:39708331..39708824mRNAPaHa10g13060.1
exon
part_ofPaHa10g13060.1-exon-10-1787993825:39709228..39709283mRNAPaHa10g13060.1
exon
part_ofPaHa10g13060.1-exon-10-1787993825:39709902..39709977mRNAPaHa10g13060.1
exon
part_ofPaHa10g13060.1-exon-10-1787993825:39710683..39710771mRNAPaHa10g13060.1
