Feature identity
- Identifier
- PaHa10g12440.1
- Feature type
- mRNA
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 423 bp
- Genomic location
- 10:37,259,957–37,260,379
- Strand
- −
Hass · mRNA
PaHa10g12440.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 423
- bp
- 10:37,259,957–37,260,379
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: PaHa10g12440
- eggNOG
- Preferred name: LOC110778021 | Seed ortholog: 337451.A0A3S3NK97 | COG: S | eggNOG OG: HTH_3@131567|bK-22, HTH_3@35493|NMa-37, MBF1@2759|A-1, MBF1@35493|BL-12
- Gene Ontology
- GO:0003700 DNA-binding transcription factor activity; GO:0003713 transcription coactivator activity; GO:0005634 nucleus; GO:0005730 nucleolus; GO:0009408 response to heat; GO:0009414 response to water deprivation; GO:0009737 response to abscisic acid; GO:0009873 ethylene-activated signaling pathway; GO:0045893 positive regulation of DNA-templated transcription; GO:0071456 cellular response to hypoxia
- KEGG
- KO: K03627 | Pathway: 03010 | BRITE: 00001
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePaHa10g12440.1-protein
derives_frommRNAPaHa10g12440.1
mRNAPaHa10g12440.1
part_ofgenePaHa10g12440
CDS
part_ofPaHa10g12440.1-CDS-10-1787993825:37259957..37260379mRNAPaHa10g12440.1
exon
part_ofPaHa10g12440.1-exon-10-1787993825:37259957..37260379mRNAPaHa10g12440.1
