Anise · gene

scaffold18.g83369

A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.

1,419
bp
scaffold18:51,259–52,677
genomic location
Record overview

Feature identity

Identifier
scaffold18.g83369
Feature type
gene
Genome collection
Anise
Organism
Persea americana-Anise
Sequence length
1,419 bp
Genomic location
scaffold18:51,259–52,677
Strand
−
Open original Tripal record
Computational annotation

Functional evidence

These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.

eggNOG
218851.Aquca_044_00093.1,S,[One of the components of the core complex of photosystem II (PSII). It binds chlorophyll and helps catalyze the primary light-induced photochemical processes of PSII. PSII is a light- driven water plastoquinone oxidoreductase, using light energy to abstract electrons from H(2)O, generating O(2) and a proton gradient subsequently used for ATP formation]
Gene Ontology
One of the components of the core complex of photosystem II (PSII). It binds chlorophyll and helps catalyze the primary light-induced photochemical processes of PSII. PSII is a light- driven water plastoquinone oxidoreductase, using light energy to abstract electrons from H(2)O, generating O(2) and a proton gradient subsequently used for ATP formation | GO:0006091//generation of precursor metabolites and energy; GO:0008150//biological_process; GO:0008152//metabolic process; GO:0009987//cellular process; GO:0010207//photosystem II assembly; GO:0015979//photosynthesis; GO:0016043//cellular component organization; GO:0019684//photosynthesis, light reaction; GO:0022607//cellular component assembly; GO:0034622//cellular macromolecular complex assembly; GO:0043933//macromolecular complex subunit organization; GO:0044085//cellular component biogenesis; GO:0044237//cellular metabolic process; GO:0065003//macromolecular complex assembly; GO:0071840//cellular component organization or biogenesis | GO:0005575//cellular_component; GO:0005622//intracellular; GO:0005623//cell; GO:0005737//cytoplasm; GO:0009507//chloroplast; GO:0009532//plastid stroma; GO:0009534//chloroplast thylakoid; GO:0009535//chloroplast thylakoid membrane; GO:0009536//plastid; GO:0009570//chloroplast stroma; GO:0009579//thylakoid; GO:0010287//plastoglobule; GO:0016020//membrane; GO:0031976//plastid thylakoid; GO:0031984//organelle subcompartment; GO:0034357//photosynthetic membrane; GO:0042651//thylakoid membrane; GO:0043226//organelle; GO:0043227//membrane-bounded organelle; GO:0043229//intracellular organelle; GO:0043231//intracellular membrane-bounded organelle; GO:0044422//organelle part; GO:0044424//intracellular part; GO:0044434//chloroplast part; GO:0044435//plastid part; GO:0044436//thylakoid part; GO:0044444//cytoplasmic part; GO:0044446//intracellular organelle part; GO:0044464//cell part; GO:0055035//plastid thylakoid membrane | -
KEGG
K02704 | psbB
NR
YP_009172005.1 photosystem II CP47 chlorophyll apoprotein [Machilus yunnanensis]
Swiss-Prot
Q0G9J3.1 RecName: Full=Photosystem II CP47 reaction center protein; AltName: Full=PSII 47 kDa protein; AltName: Full=Protein CP-47 [Liriodendron tulipifera]
Biological context

Connected feature records

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